Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 RNU6-1226P-201ENST00000384317 107 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 RNU6-821P-201ENST00000390995 107 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AL136372.1-201ENST00000403060 228 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 DHFRP5-201ENST00000406944 564 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 RPS3AP24-201ENST00000407896 734 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 HMGB3P2-201ENST00000411913 584 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 ZNF90P2-204ENST00000419323 1075 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AC245028.1-201ENST00000423259 256 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 RPF2P1-201ENST00000424137 906 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 MTCO1P39-201ENST00000426148 480 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AC005019.1-201ENST00000436455 431 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 RPL7P29-201ENST00000437151 728 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AC003982.1-202ENST00000469928 248 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AC079804.2-201ENST00000490376 200 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AC083906.5-201ENST00000503722 328 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 MRPS36P2-201ENST00000512569 299 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 RNU7-193P-201ENST00000516723 65 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 PAICSP4-201ENST00000517543 1253 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 CASP1P1-201ENST00000526345 212 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 OR5B10P-201ENST00000532869 642 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AC012254.4-201ENST00000588843 273 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 CCDC58P3-201ENST00000590792 430 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AL109918.3-201ENST00000603072 338 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AC135507.1-201ENST00000607214 561 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AC117490.2-201ENST00000610042 594 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AC018445.2-201ENST00000622987 260 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AL022578.1-201ENST00000439330 1433 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 AC000403.1-201ENST00000613696 3585 ntBASIC1.38□□□□□ -2.19
SPTSSBQ8NFR3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AC012618.3-205ENST00000637896 1496 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 SNORA38-201ENST00000363946 132 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 SNORA71.1-201ENST00000364523 117 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 U3.22-201ENST00000391120 215 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 SSXP10-201ENST00000402595 565 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AL122016.1-201ENST00000403365 367 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 RN7SKP159-201ENST00000410657 292 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 HMGB3P31-201ENST00000413333 595 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 MYL8P-204ENST00000431574 518 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 USP12PX-201ENST00000432383 1057 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 ARPC3P1-201ENST00000437218 533 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 RPL21P23-201ENST00000446654 460 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AL359073.1-201ENST00000448036 403 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 MTND2P19-201ENST00000449129 1012 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AC112492.1-201ENST00000449607 712 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 NIPA2P5-201ENST00000452282 464 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 TRGVB-201ENST00000453257 471 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 MTATP6P7-201ENST00000453315 681 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AC128713.1-201ENST00000471495 306 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AC021678.1-201ENST00000505195 936 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AC025884.1-201ENST00000556034 378 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AC090888.3-201ENST00000558917 509 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 EIF5A2P1-201ENST00000564027 460 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AC119501.1-201ENST00000603646 475 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AC002487.1-201ENST00000604565 994 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AC013468.1-201ENST00000608680 598 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AP005212.4-201ENST00000614206 710 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AL355493.4-201ENST00000618530 292 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 AC244258.1-201ENST00000637553 1071 ntBASIC1.37□□□□□ -2.19
SPTSSBQ8NFR3 MTND2P41-201ENST00000637599 773 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms