Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 HSPD1P15-201ENST00000505573 1122 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC103851.1-201ENST00000506833 274 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 RNA5SP249-201ENST00000516127 99 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC021006.3-201ENST00000530771 192 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC068446.3-201ENST00000555285 382 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 RN7SL176P-201ENST00000580352 264 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 SNORA74C-1-201ENST00000580726 201 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC243960.4-201ENST00000600532 288 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC068790.3-201ENST00000602988 553 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AL161729.3-201ENST00000603533 673 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 OR6R2P-201ENST00000609216 300 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC105429.2-201ENST00000610567 517 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 Y_RNA.812-201ENST00000610788 101 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 uc_338.5-201ENST00000611839 155 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 Y_RNA.784-201ENST00000613803 101 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 uc_338.12-201ENST00000616344 181 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 Y_RNA.787-201ENST00000616522 101 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 Y_RNA.780-201ENST00000617336 101 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 Y_RNA.801-201ENST00000619005 101 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 AC015871.5-202ENST00000623252 701 ntBASIC4.23□□□□□ -1.73
CPEB3Q8NE35 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CPEB3Q8NE35 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 AL645937.1-201ENST00000641739 1652 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 AL672167.1-204ENST00000641875 3017 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 OR4G1P-203ENST00000641984 1631 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 AC009902.3-201ENST00000606235 2172 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 Y_RNA.162-201ENST00000363683 102 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 RAB28P1-201ENST00000411517 641 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 AC137499.1-201ENST00000427602 88 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 TIMM9P1-201ENST00000436122 256 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 AL138799.3-201ENST00000438968 350 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 DDX3P2-201ENST00000446138 111 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 EIF4A1P11-201ENST00000451239 222 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 RN7SL826P-201ENST00000479724 288 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 AC090686.1-201ENST00000481577 749 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 RN7SL558P-201ENST00000497468 299 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 AC026427.2-201ENST00000506228 536 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 TMEM248P1-201ENST00000510579 951 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 RNU6-709P-201ENST00000517257 104 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 OR4P1P-201ENST00000530808 1136 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 AC087241.2-201ENST00000535801 324 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 SETP2-201ENST00000553886 926 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 CYCSP40-201ENST00000575927 294 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 AC105224.1-201ENST00000587055 421 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 GLUD1P4-201ENST00000590914 418 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 KC877982.1-201ENST00000602313 470 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 AC021646.1-201ENST00000605469 484 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 AL121932.1-201ENST00000605542 214 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 AC087385.3-201ENST00000620477 187 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 C2orf27A-204ENST00000623058 969 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 CR381572.2-201ENST00000624852 397 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 AL159972.1-201ENST00000625150 448 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 SAMMSON-226ENST00000642089 1582 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 AL031119.1-201ENST00000404707 1879 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CPEB3Q8NE35 SDAD1P1-202ENST00000524156 2051 ntBASIC4.22□□□□□ -1.73
CPEB3Q8NE35 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CPEB3Q8NE35 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CPEB3Q8NE35 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CPEB3Q8NE35 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.21□□□□□ -1.73
CPEB3Q8NE35 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CPEB3Q8NE35 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms