Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AC011611.1-201ENST00000552179 197 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AC055876.1-202ENST00000567053 138 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AC010201.1-201ENST00000605051 540 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 HSPE1P14-201ENST00000605812 302 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 Z98200.1-201ENST00000607298 470 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 BX664608.1-201ENST00000610519 487 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AC091905.2-201ENST00000623143 306 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AC005858.4-201ENST00000623191 700 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AC138649.5-201ENST00000637456 137 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
LINC00116Q8NCU8 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.4□□□□□ -1.55
LINC00116Q8NCU8 AL049780.3-201ENST00000624612 1583 ntBASIC5.4□□□□□ -1.55
LINC00116Q8NCU8 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.4□□□□□ -1.55
LINC00116Q8NCU8 AC134882.1-201ENST00000603738 1676 ntBASIC5.4□□□□□ -1.55
LINC00116Q8NCU8 AC011755.1-201ENST00000623763 2049 ntBASIC5.4□□□□□ -1.55
LINC00116Q8NCU8 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.4□□□□□ -1.55
LINC00116Q8NCU8 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
LINC00116Q8NCU8 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 Y_RNA.166-201ENST00000363730 102 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 SNORA51.2-201ENST00000364595 132 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 RNU6-744P-201ENST00000365557 107 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 Y_RNA.394-201ENST00000383942 103 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 RNU6-1316P-201ENST00000384242 108 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 EIF5P1-201ENST00000400019 1231 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 BTBD10P2-201ENST00000404779 676 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 RNU6-1068P-201ENST00000410958 103 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AL353777.1-201ENST00000425552 326 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 RPS20P32-201ENST00000456044 356 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 RNA5SP401-201ENST00000515920 127 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 RN7SKP96-201ENST00000516948 297 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AC105029.1-201ENST00000520250 669 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AC123904.2-201ENST00000548059 300 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AL352979.3-201ENST00000553515 247 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AC022655.2-201ENST00000577280 318 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 MIR3167-201ENST00000579623 85 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AC007687.1-201ENST00000602704 304 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AC121334.2-201ENST00000605387 271 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AL365204.3-201ENST00000612448 685 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AC002550.2-201ENST00000621246 394 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AC007546.2-201ENST00000623996 360 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AC009161.2-201ENST00000624626 138 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 AC006971.1-201ENST00000407916 4486 ntBASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LINC00116Q8NCU8 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 RNU6-223P-201ENST00000362830 107 ntBASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 RNA5SP307-201ENST00000362863 116 ntBASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 Y_RNA.67-201ENST00000362870 100 ntBASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 RNU6-1120P-201ENST00000362988 108 ntBASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 RNU6-853P-201ENST00000364306 107 ntBASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 RNU6-359P-201ENST00000365466 108 ntBASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 SNORA20.2-201ENST00000383922 131 ntBASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 RNU6-921P-201ENST00000384361 107 ntBASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 AL122016.1-201ENST00000403365 367 ntBASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 RPL35AP12-201ENST00000425362 338 ntBASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 CEACAMP1-201ENST00000434624 1035 ntBASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 HMGB3P9-201ENST00000441799 583 ntBASIC5.38□□□□□ -1.55
LINC00116Q8NCU8 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms