Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 AL136363.1-201ENST00000605349 337 ntBASIC3.98□□□□□ -1.77
PNLDC1Q8NA58 AC121334.2-201ENST00000605387 271 ntBASIC3.98□□□□□ -1.77
PNLDC1Q8NA58 AL161616.1-201ENST00000611867 286 ntBASIC3.98□□□□□ -1.77
PNLDC1Q8NA58 AC091905.2-201ENST00000623143 306 ntBASIC3.98□□□□□ -1.77
PNLDC1Q8NA58 AC024614.3-201ENST00000637860 256 ntBASIC3.98□□□□□ -1.77
PNLDC1Q8NA58 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.98□□□□□ -1.77
PNLDC1Q8NA58 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PNLDC1Q8NA58 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.98□□□□□ -1.77
PNLDC1Q8NA58 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.98□□□□□ -1.77
PNLDC1Q8NA58 AL122126.1-201ENST00000546905 1318 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 SNORD56.2-201ENST00000363242 71 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 SNORA71.2-201ENST00000364941 134 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 RNU6-359P-201ENST00000365466 108 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 Y_RNA.509-201ENST00000384506 99 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 RPS4XP9-201ENST00000405151 780 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 NUP35P2-201ENST00000416748 943 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AC127526.1-201ENST00000417526 366 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 MTND1P14-201ENST00000427400 950 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 CALM1P1-201ENST00000442082 433 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 USP9YP15-201ENST00000442391 422 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 GEMIN8P3-201ENST00000445417 720 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AC010733.1-201ENST00000451515 401 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 HMGB1P15-201ENST00000453854 435 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AC055855.1-201ENST00000489563 579 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AC079382.1-201ENST00000493346 557 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 OR5H5P-201ENST00000503164 928 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AC139783.2-201ENST00000504847 1145 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 VWA8P1-201ENST00000510889 176 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 RNA5SP154-201ENST00000516193 111 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AC090572.1-201ENST00000519251 160 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AC090151.1-201ENST00000520784 730 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AP003497.1-201ENST00000528472 562 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 OR5BC1P-201ENST00000529327 739 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AC124068.1-201ENST00000563131 678 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AL139395.1-201ENST00000603662 160 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AL121757.2-201ENST00000611223 313 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 RMST_9.1-201ENST00000619945 193 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 AC009161.2-201ENST00000624626 138 ntBASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.97□□□□□ -1.77
PNLDC1Q8NA58 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 AL391684.1-202ENST00000641293 1636 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 RNA5SP258-201ENST00000362750 119 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 RNA5SP513-201ENST00000364648 118 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 Y_RNA.263-201ENST00000364659 114 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 RNY4P16-201ENST00000364768 94 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 RNA5SP22-201ENST00000365393 109 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 SNORA20.2-201ENST00000383922 131 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 RNU1-44P-201ENST00000384453 163 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 RNU6-878P-201ENST00000384578 110 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 MIR93-201ENST00000385024 80 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 RNU6-1158P-201ENST00000391167 107 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 AC004987.3-201ENST00000413879 771 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 RPS26P47-201ENST00000427219 348 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 EZH2P1-201ENST00000431167 291 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 AC007686.1-201ENST00000488511 463 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 RPL23AP72-201ENST00000492447 435 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 HMGB1P21-201ENST00000502313 581 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 AC110792.2-201ENST00000510278 224 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 MTND3P22-201ENST00000510932 243 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 RNA5SP228-201ENST00000516232 133 ntBASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.96□□□□□ -1.78
PNLDC1Q8NA58 AC090281.1-201ENST00000523019 276 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms