Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AC107027.3-201ENST00000565095 3473 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 GNG5P1-201ENST00000255500 204 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 RNU6-984P-201ENST00000363236 109 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 RNU6-1085P-201ENST00000363576 107 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 Y_RNA.333-201ENST00000365274 102 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 RNU6-444P-201ENST00000383988 108 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 RNU6-116P-201ENST00000384042 109 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 RNU6-952P-201ENST00000391164 108 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AC097374.1-203ENST00000400783 485 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 DHFRP6-201ENST00000401776 268 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 RPS20P2-201ENST00000402520 389 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AL592291.1-201ENST00000403830 352 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 MIR320C1-201ENST00000408566 88 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 JKAMPP1-201ENST00000413804 919 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 CRYBB2P1-203ENST00000415709 538 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 SPA17P1-201ENST00000416656 452 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AL353193.1-201ENST00000421444 268 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AC018644.1-201ENST00000429934 551 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AC002486.1-201ENST00000435098 391 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 SDCBPP1-201ENST00000440192 890 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 RPL23AP16-201ENST00000441715 421 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 ARPC3P5-201ENST00000448802 534 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AC132479.1-201ENST00000449160 144 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 RPL23AP15-201ENST00000450202 459 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 RPL37P3-201ENST00000456825 293 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 RN7SL809P-201ENST00000482040 297 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AC114786.4-201ENST00000508771 728 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AC025465.4-201ENST00000513422 638 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 RNU6-488P-201ENST00000515918 99 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AC104986.1-201ENST00000517978 436 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AP003034.1-201ENST00000534621 422 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 HSPE1P3-201ENST00000559254 309 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AC009101.1-201ENST00000568135 242 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 TPMTP1-201ENST00000592307 737 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 CKS1BP3-201ENST00000600888 237 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AC244100.1-202ENST00000621554 382 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AL732618.1-201ENST00000623251 301 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 MIR3662-201ENST00000637030 95 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 OR11H5P-202ENST00000641612 1325 ntBASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SLC44A3Q8N4M1 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 CCT4P2-201ENST00000233836 1548 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 OR5J1P-201ENST00000313544 939 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 Y_RNA.159-201ENST00000363674 87 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 SNORD46.1-201ENST00000364139 104 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 RNU6-877P-201ENST00000383868 107 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 RPL7P25-201ENST00000404151 721 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 RNU6-908P-201ENST00000410160 94 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AC009302.1-201ENST00000417147 390 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 RPL31P35-201ENST00000431058 377 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 RPL17P49-201ENST00000443728 411 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 RPL23AP81-201ENST00000455252 467 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 PMCHL2-203ENST00000457791 237 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AC022364.2-201ENST00000457963 554 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms