Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 RNA5SP435-201ENST00000364044 108 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 Y_RNA.276-201ENST00000364732 109 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 SNORD14.1-201ENST00000365609 90 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 Y_RNA.485-201ENST00000384395 102 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 AL138885.1-201ENST00000405921 675 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 AL353621.1-201ENST00000418219 243 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 RPS15AP6-201ENST00000420703 385 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 POU5F1P5-201ENST00000445059 658 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 RPS24P16-201ENST00000497294 392 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 SLC25A15P5-201ENST00000508033 253 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 RNU6-408P-201ENST00000515910 100 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 AC131281.1-201ENST00000522984 164 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 AC007448.1-201ENST00000582714 234 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 AC005357.1-201ENST00000588399 301 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 OR1M4P-201ENST00000589199 287 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 AL160281.1-201ENST00000605307 311 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 AL161616.1-201ENST00000611867 286 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 AL353748.2-201ENST00000622148 471 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 MIR4272-201ENST00000635924 64 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 AC008669.1-201ENST00000565823 2178 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 AL592437.2-201ENST00000421655 2434 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 RNA5SP453-201ENST00000362503 119 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 SNORA36C-201ENST00000384289 132 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 MIR578-201ENST00000384828 96 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 AL109941.1-201ENST00000401925 229 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 AL356968.1-201ENST00000416622 474 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 AC108032.1-201ENST00000416706 207 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 MTATP6P4-201ENST00000427725 675 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 AC126120.1-201ENST00000431082 470 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 CYCSP51-201ENST00000443545 318 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 RPL23AP31-201ENST00000456160 467 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 AC087588.1-201ENST00000462203 316 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 AP000942.1-201ENST00000463969 747 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 AC124945.1-201ENST00000485133 188 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 RPS15AP34-201ENST00000487776 387 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 RN7SL362P-201ENST00000494228 267 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 MTND3P25-201ENST00000509243 135 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 AC008716.1-201ENST00000511084 513 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 AC008489.1-201ENST00000524271 483 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 RNA5SP439-201ENST00000617595 124 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 ZNF285B-201ENST00000561698 1767 ntBASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
DEPDC4Q8N2C3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 MIR133A2-201ENST00000347538 102 ntBASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 Y_RNA.314-201ENST00000365114 102 ntBASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 AL030996.1-201ENST00000411430 235 ntBASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 AC099782.1-201ENST00000425889 474 ntBASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms