Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SYNE4Q8N205 MT-TL1-201ENST00000386347 75 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SYNE4Q8N205 RPS3AP36-201ENST00000398190 775 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 AC109780.2-201ENST00000413467 845 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.84□□□□□ -1.63
SYNE4Q8N205 AL139413.1-201ENST00000421309 217 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 AL590609.2-201ENST00000421430 368 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.84□□□□□ -1.63
SYNE4Q8N205 MTCO3P1-205ENST00000422088 832 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 AC007742.1-201ENST00000425789 329 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 AL356583.2-201ENST00000426536 280 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 AL591419.1-201ENST00000427423 339 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.84□□□□□ -1.63
SYNE4Q8N205 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.84□□□□□ -1.63
SYNE4Q8N205 ELOCP26-201ENST00000436067 329 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.84□□□□□ -1.63
SYNE4Q8N205 MTND3P10-201ENST00000450967 341 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.84□□□□□ -1.63
SYNE4Q8N205 AC013828.1-201ENST00000481845 158 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 AC025554.1-201ENST00000505641 188 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 HMGN1P11-201ENST00000508668 303 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.84□□□□□ -1.63
SYNE4Q8N205 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.84□□□□□ -1.63
SYNE4Q8N205 OR8L1P-201ENST00000534005 955 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.84□□□□□ -1.63
SYNE4Q8N205 AC090616.5-202ENST00000582111 297 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 VN1R79P-201ENST00000593540 513 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.84□□□□□ -1.63
SYNE4Q8N205 AC131902.3-201ENST00000611767 581 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 AL359535.1-201ENST00000612100 1087 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 AC079684.1-201ENST00000621405 437 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 AC099654.5-201ENST00000636479 350 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 AL773545.4-201ENST00000637262 310 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 AL513478.4-201ENST00000641636 310 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SYNE4Q8N205 MAPK10-349ENST00000641767 3661 ntBASIC4.84□□□□□ -1.63
SYNE4Q8N205 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.84□□□□□ -1.63
SYNE4Q8N205 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.84□□□□□ -1.64
SYNE4Q8N205 AC139713.2-215ENST00000641428 5037 ntBASIC4.84□□□□□ -1.64
SYNE4Q8N205 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
SYNE4Q8N205 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.84□□□□□ -1.64
SYNE4Q8N205 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.83□□□□□ -1.64
SYNE4Q8N205 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SYNE4Q8N205 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SYNE4Q8N205 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SYNE4Q8N205 CASC19-280ENST00000642102 1351 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 AC107982.1-201ENST00000507171 1300 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SYNE4Q8N205 RNU6-1066P-201ENST00000363573 105 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.83□□□□□ -1.64
SYNE4Q8N205 SUGT1P1-201ENST00000379514 476 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SYNE4Q8N205 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SYNE4Q8N205 Y_RNA.453-201ENST00000384223 109 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 RNU6-876P-201ENST00000391295 104 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 AL590002.1-201ENST00000406554 418 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.83□□□□□ -1.64
SYNE4Q8N205 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.83□□□□□ -1.64
SYNE4Q8N205 MTND4LP10-201ENST00000435146 291 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 MTCO3P18-201ENST00000440206 761 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.83□□□□□ -1.64
SYNE4Q8N205 MTCO1P48-201ENST00000448024 1096 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 NPM1P39-201ENST00000449818 867 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 NF1P3-201ENST00000457709 450 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 AC010307.1-201ENST00000467206 836 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.83□□□□□ -1.64
SYNE4Q8N205 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.83□□□□□ -1.64
SYNE4Q8N205 PTGES3P3-201ENST00000511479 482 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 AC021146.3-201ENST00000511911 260 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.83□□□□□ -1.64
SYNE4Q8N205 AF131216.2-201ENST00000512316 564 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 AC010342.1-201ENST00000514047 877 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 AC046134.1-201ENST00000514454 666 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 MTCO1P30-201ENST00000515244 580 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 RNU6-430P-201ENST00000517078 107 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.83□□□□□ -1.64
SYNE4Q8N205 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.83□□□□□ -1.64
SYNE4Q8N205 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.83□□□□□ -1.64
SYNE4Q8N205 SULT1C2P2-201ENST00000562517 294 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.83□□□□□ -1.64
SYNE4Q8N205 AC136618.2-201ENST00000575091 400 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 MIR5697-201ENST00000578045 78 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 DUXAP4-201ENST00000603046 613 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 RNU1-30P-201ENST00000606575 163 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 AL354760.1-201ENST00000608357 643 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.83□□□□□ -1.64
SYNE4Q8N205 AC104010.1-201ENST00000616889 150 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.83□□□□□ -1.64
SYNE4Q8N205 MIR6863-201ENST00000636112 90 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 AC119674.1-207ENST00000641355 633 ntBASIC4.83□□□□□ -1.64
SYNE4Q8N205 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SYNE4Q8N205 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SYNE4Q8N205 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.83□□□□□ -1.64
SYNE4Q8N205 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SYNE4Q8N205 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SYNE4Q8N205 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.83□□□□□ -1.64
SYNE4Q8N205 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SYNE4Q8N205 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SYNE4Q8N205 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms