Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 MIR208A-201ENST00000362287 71 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 RNU6-50P-201ENST00000362356 103 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 MCTS2P-201ENST00000394552 546 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 ELOCP13-201ENST00000443934 329 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 AL671855.1-201ENST00000446875 1203 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 RPL23AP20-201ENST00000447965 421 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 AC112492.1-201ENST00000449607 712 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 HMGN3P1-201ENST00000453847 193 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 RN7SL499P-201ENST00000481141 276 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 OR5H5P-201ENST00000503164 928 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 AP003066.2-201ENST00000529375 555 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 AC109635.4-202ENST00000531666 412 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 HSPE1P20-201ENST00000538133 289 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 AC092451.2-201ENST00000538746 658 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 AC023825.1-201ENST00000566704 1030 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 MIR4666A-201ENST00000580160 79 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 AC002487.1-201ENST00000604565 994 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 AC004696.1-201ENST00000614345 607 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 CYCSP41-201ENST00000616920 296 ntBASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CCDC65Q8IXS2 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 RNU6-989P-201ENST00000362756 107 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 RNU6-263P-201ENST00000363811 107 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 RNU6-730P-201ENST00000383954 104 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 RNU6-1181P-201ENST00000384191 106 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 RNU6-339P-201ENST00000384310 107 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 RNU6-851P-201ENST00000384565 107 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 MTCO2P31-201ENST00000402702 684 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 SSXP9-201ENST00000417503 292 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 AC096632.1-201ENST00000427395 310 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 AP000949.1-201ENST00000438328 629 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 AC127537.2-201ENST00000439258 465 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 AL592437.1-201ENST00000443781 492 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 SYPL1P1-201ENST00000473622 768 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 AC017015.1-201ENST00000477387 286 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 AC098799.2-201ENST00000509466 868 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 AC112198.4-201ENST00000515450 351 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 RNA5SP341-201ENST00000516261 117 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 HMGB1P1-201ENST00000522557 636 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 AC096947.1-201ENST00000603233 470 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 AC113368.1-201ENST00000603736 382 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 VIS1.1-201ENST00000610517 203 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 AL162274.2-201ENST00000614406 332 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 Z99129.2-201ENST00000619967 314 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 AC006249.1-201ENST00000621223 471 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 AC009039.2-201ENST00000624524 529 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 ZNF734P-201ENST00000419494 1534 ntBASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC65Q8IXS2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 RNU1-35P-201ENST00000362782 153 ntBASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 AL139098.1-201ENST00000407291 389 ntBASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 FCF1P2-201ENST00000415284 583 ntBASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 FNDC3CP-201ENST00000420795 1155 ntBASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 SAR1AP4-201ENST00000429225 591 ntBASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 RPL23AP58-201ENST00000440453 469 ntBASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 AL445669.2-201ENST00000454425 421 ntBASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 AC118282.1-201ENST00000506408 765 ntBASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 AC048346.1-201ENST00000510247 144 ntBASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 SCGB1D5P-201ENST00000515134 247 ntBASIC3.22□□□□□ -1.89
CCDC65Q8IXS2 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms