Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 U6.48-201ENST00000618523 106 ntBASIC2.31□□□□□ -2.04
LRRC28Q86X40 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LRRC28Q86X40 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.31□□□□□ -2.04
LRRC28Q86X40 AC103798.2-201ENST00000624292 632 ntBASIC2.31□□□□□ -2.04
LRRC28Q86X40 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.31□□□□□ -2.04
LRRC28Q86X40 MTND4P31-201ENST00000425607 1343 ntBASIC2.31□□□□□ -2.04
LRRC28Q86X40 AL512283.1-201ENST00000606756 1384 ntBASIC2.31□□□□□ -2.04
LRRC28Q86X40 AC007342.9-201ENST00000623877 1385 ntBASIC2.31□□□□□ -2.04
LRRC28Q86X40 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.31□□□□□ -2.04
LRRC28Q86X40 ZNF734P-201ENST00000419494 1534 ntBASIC2.31□□□□□ -2.04
LRRC28Q86X40 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LRRC28Q86X40 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.3□□□□□ -2.04
LRRC28Q86X40 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
LRRC28Q86X40 RNU1-112P-201ENST00000364401 164 ntBASIC2.3□□□□□ -2.04
LRRC28Q86X40 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.3□□□□□ -2.04
LRRC28Q86X40 RNA5SP184-201ENST00000411071 108 ntBASIC2.3□□□□□ -2.04
LRRC28Q86X40 RPLP0P7-201ENST00000416050 667 ntBASIC2.3□□□□□ -2.04
LRRC28Q86X40 AC234782.4-201ENST00000417646 1048 ntBASIC2.3□□□□□ -2.04
LRRC28Q86X40 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.3□□□□□ -2.04
LRRC28Q86X40 AL355994.1-201ENST00000424379 260 ntBASIC2.3□□□□□ -2.04
LRRC28Q86X40 AC019097.1-201ENST00000424783 735 ntBASIC2.3□□□□□ -2.04
LRRC28Q86X40 AC063976.3-201ENST00000426849 329 ntBASIC2.3□□□□□ -2.04
LRRC28Q86X40 MTCO1P57-201ENST00000432182 261 ntBASIC2.3□□□□□ -2.04
LRRC28Q86X40 AC112220.1-201ENST00000434628 355 ntBASIC2.3□□□□□ -2.04
LRRC28Q86X40 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.3□□□□□ -2.04
LRRC28Q86X40 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LRRC28Q86X40 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.3□□□□□ -2.04
LRRC28Q86X40 SYPL1P1-201ENST00000473622 768 ntBASIC2.3□□□□□ -2.04
LRRC28Q86X40 HMGB1P22-201ENST00000505315 124 ntBASIC2.3□□□□□ -2.04
LRRC28Q86X40 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.3□□□□□ -2.04
LRRC28Q86X40 AC119751.5-201ENST00000514077 770 ntBASIC2.3□□□□□ -2.04
LRRC28Q86X40 SNORA31.11-201ENST00000516528 139 ntBASIC2.3□□□□□ -2.04
LRRC28Q86X40 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.3□□□□□ -2.04
LRRC28Q86X40 AC100870.1-201ENST00000522035 505 ntBASIC2.3□□□□□ -2.04
LRRC28Q86X40 HAUS1P3-201ENST00000523909 662 ntBASIC2.3□□□□□ -2.04
LRRC28Q86X40 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.3□□□□□ -2.04
LRRC28Q86X40 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.3□□□□□ -2.04
LRRC28Q86X40 AC245036.5-201ENST00000596330 847 ntBASIC2.3□□□□□ -2.04
LRRC28Q86X40 LINC00216-201ENST00000623548 1126 ntBASIC2.3□□□□□ -2.04
LRRC28Q86X40 AP003485.2-201ENST00000623636 610 ntBASIC2.3□□□□□ -2.04
LRRC28Q86X40 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.3□□□□□ -2.04
LRRC28Q86X40 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
LRRC28Q86X40 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
LRRC28Q86X40 AC099654.7-201ENST00000635788 2127 ntBASIC2.3□□□□□ -2.04
LRRC28Q86X40 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
LRRC28Q86X40 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.29□□□□□ -2.04
LRRC28Q86X40 AC093536.2-201ENST00000565257 1406 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LRRC28Q86X40 FRG1BP-201ENST00000278882 761 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LRRC28Q86X40 U8.8-201ENST00000365399 135 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 MTATP6P31-201ENST00000406985 692 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.29□□□□□ -2.04
LRRC28Q86X40 AL592148.1-201ENST00000413568 445 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 LINC01347-201ENST00000417964 355 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 AL606495.1-201ENST00000422100 813 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.29□□□□□ -2.04
LRRC28Q86X40 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.29□□□□□ -2.04
LRRC28Q86X40 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.29□□□□□ -2.04
LRRC28Q86X40 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.29□□□□□ -2.04
LRRC28Q86X40 AC004062.1-201ENST00000509926 645 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 RNU6-889P-201ENST00000517189 103 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 RN7SKP40-201ENST00000517211 242 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.29□□□□□ -2.04
LRRC28Q86X40 AC008562.1-201ENST00000521763 330 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 CIR1P1-201ENST00000524055 1133 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.29□□□□□ -2.04
LRRC28Q86X40 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.29□□□□□ -2.04
LRRC28Q86X40 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.29□□□□□ -2.04
LRRC28Q86X40 VN1R90P-201ENST00000595717 726 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 AL035413.2-201ENST00000604801 525 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 AC024560.3-201ENST00000608482 349 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 AL137847.3-201ENST00000611521 109 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.29□□□□□ -2.04
LRRC28Q86X40 AC007998.5-201ENST00000622938 237 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 AC020923.1-201ENST00000624021 917 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 AC024023.1-201ENST00000624530 922 ntBASIC2.29□□□□□ -2.04
LRRC28Q86X40 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
LRRC28Q86X40 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
LRRC28Q86X40 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LRRC28Q86X40 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LRRC28Q86X40 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.28□□□□□ -2.04
LRRC28Q86X40 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LRRC28Q86X40 ANAPC10P1-201ENST00000395991 556 ntBASIC2.28□□□□□ -2.04
LRRC28Q86X40 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.28□□□□□ -2.04
LRRC28Q86X40 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.28□□□□□ -2.04
LRRC28Q86X40 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.28□□□□□ -2.04
LRRC28Q86X40 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.28□□□□□ -2.04
LRRC28Q86X40 Z77249.1-201ENST00000444622 1175 ntBASIC2.28□□□□□ -2.04
LRRC28Q86X40 TPTE2P6-202ENST00000445572 1007 ntBASIC2.28□□□□□ -2.04
LRRC28Q86X40 SNORD109B-201ENST00000458961 67 ntBASIC2.28□□□□□ -2.04
LRRC28Q86X40 SNORD109A-201ENST00000459128 67 ntBASIC2.28□□□□□ -2.04
LRRC28Q86X40 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.28□□□□□ -2.04
LRRC28Q86X40 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.28□□□□□ -2.04
LRRC28Q86X40 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.28□□□□□ -2.04
LRRC28Q86X40 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.28□□□□□ -2.04
LRRC28Q86X40 HMGB1P47-201ENST00000511281 589 ntBASIC2.28□□□□□ -2.04
LRRC28Q86X40 AC034159.1-201ENST00000513885 583 ntBASIC2.28□□□□□ -2.04
LRRC28Q86X40 SNORA31.21-201ENST00000517180 77 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms