Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 MUPP-201ENST00000438111 566 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AF228730.2-201ENST00000438784 848 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 RPL36AP33-201ENST00000450395 310 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 ATG12P2-201ENST00000456830 416 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 MEMO1P3-201ENST00000459811 302 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AP001992.1-205ENST00000462248 379 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 RPL31P50-201ENST00000471002 296 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 LINC00888-204ENST00000487386 421 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AC104685.1-201ENST00000502445 371 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AC108043.1-201ENST00000512696 574 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AC103988.1-201ENST00000566382 2177 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AL353778.1-201ENST00000603149 408 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AL139344.1-201ENST00000605228 195 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AL133507.1-201ENST00000605269 557 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 RNU6-88P-201ENST00000606801 100 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AC091304.6-201ENST00000619761 202 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AC018816.2-201ENST00000621460 353 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AL445264.1-201ENST00000621719 171 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AL359715.5-201ENST00000623431 443 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AP003485.2-201ENST00000623636 610 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AL645937.1-201ENST00000641739 1652 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AL022578.1-201ENST00000439330 1433 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 RNU6-462P-201ENST00000362659 105 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 RNU6-952P-201ENST00000391164 108 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AL590084.2-201ENST00000401481 382 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 FAT1P1-201ENST00000406588 507 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 MTCO1P39-201ENST00000426148 480 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 RPS6P15-201ENST00000431996 751 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 SNRPEP7-201ENST00000438350 220 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 MTND5P2-201ENST00000442927 1142 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 EEF1E1P1-201ENST00000446998 430 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AC098824.1-201ENST00000453565 980 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 RN7SL323P-201ENST00000494712 295 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 HSPE1P23-201ENST00000509838 286 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 NPM1P41-201ENST00000512920 831 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 MIR5685-201ENST00000579080 79 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AC093227.2-201ENST00000589357 285 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 VN1R90P-201ENST00000595717 726 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AC106791.2-201ENST00000604680 391 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AC018638.7-201ENST00000605836 1114 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 MIR486-1-201ENST00000612171 68 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 MIR6076-201ENST00000617521 113 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 OR6C71P-202ENST00000641886 1107 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AC087359.1-201ENST00000508335 1740 ntBASIC3.56□□□□□ -1.84
NUP54Q7Z3B4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms