Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AC008083.2-201ENST00000546707 476 ntBASIC2.5□□□□□ -2.01
UBR3Q6ZT12 OR4K7P-201ENST00000580232 945 ntBASIC2.5□□□□□ -2.01
UBR3Q6ZT12 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.5□□□□□ -2.01
UBR3Q6ZT12 AC091488.1-201ENST00000604239 660 ntBASIC2.5□□□□□ -2.01
UBR3Q6ZT12 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.5□□□□□ -2.01
UBR3Q6ZT12 XIST_intron.1-201ENST00000619444 68 ntBASIC2.5□□□□□ -2.01
UBR3Q6ZT12 RLIMP2-201ENST00000427891 1563 ntBASIC2.49□□□□□ -2.01
UBR3Q6ZT12 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
UBR3Q6ZT12 FAM35CP-201ENST00000554755 2470 ntBASIC2.49□□□□□ -2.01
UBR3Q6ZT12 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.49□□□□□ -2.01
UBR3Q6ZT12 AC009414.1-201ENST00000427200 443 ntBASIC2.49□□□□□ -2.01
UBR3Q6ZT12 AL353597.2-202ENST00000434901 373 ntBASIC2.49□□□□□ -2.01
UBR3Q6ZT12 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.49□□□□□ -2.01
UBR3Q6ZT12 YWHAZP7-201ENST00000436906 631 ntBASIC2.49□□□□□ -2.01
UBR3Q6ZT12 NAMPTP2-201ENST00000505629 1115 ntBASIC2.49□□□□□ -2.01
UBR3Q6ZT12 RNA5SP445-201ENST00000515889 115 ntBASIC2.49□□□□□ -2.01
UBR3Q6ZT12 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.49□□□□□ -2.01
UBR3Q6ZT12 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.49□□□□□ -2.01
UBR3Q6ZT12 DNAJC19P9-201ENST00000555084 351 ntBASIC2.49□□□□□ -2.01
UBR3Q6ZT12 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.49□□□□□ -2.01
UBR3Q6ZT12 MIR3683-201ENST00000580847 82 ntBASIC2.49□□□□□ -2.01
UBR3Q6ZT12 MIR4303-201ENST00000581299 66 ntBASIC2.49□□□□□ -2.01
UBR3Q6ZT12 AC068790.3-201ENST00000602988 553 ntBASIC2.49□□□□□ -2.01
UBR3Q6ZT12 AL359821.1-201ENST00000605519 182 ntBASIC2.49□□□□□ -2.01
UBR3Q6ZT12 AC099778.2-201ENST00000610904 211 ntBASIC2.49□□□□□ -2.01
UBR3Q6ZT12 AC013562.2-201ENST00000611632 603 ntBASIC2.49□□□□□ -2.01
UBR3Q6ZT12 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
UBR3Q6ZT12 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
UBR3Q6ZT12 AP001148.1-201ENST00000624124 2359 ntBASIC2.49□□□□□ -2.01
UBR3Q6ZT12 RNY1P10-201ENST00000363268 113 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AL445669.2-201ENST00000454425 421 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AC091179.1-201ENST00000461606 579 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AC007182.2-201ENST00000489251 402 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.48□□□□□ -2.01
UBR3Q6ZT12 FAM92A1P1-201ENST00000528023 890 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.48□□□□□ -2.01
UBR3Q6ZT12 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.48□□□□□ -2.01
UBR3Q6ZT12 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.48□□□□□ -2.01
UBR3Q6ZT12 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.48□□□□□ -2.01
UBR3Q6ZT12 PSMA6P4-201ENST00000603247 718 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AL391813.2-201ENST00000609113 322 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AL137847.3-201ENST00000611521 109 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AC005539.1-201ENST00000443768 1479 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
UBR3Q6ZT12 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
UBR3Q6ZT12 RNU6-661P-201ENST00000362409 107 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AL627390.1-201ENST00000396055 340 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AP1B1P2-201ENST00000416196 106 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AL096701.2-201ENST00000416920 238 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 RPL23AP63-201ENST00000498752 471 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.48□□□□□ -2.01
UBR3Q6ZT12 SUB1P3-201ENST00000564581 315 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AL670379.6-201ENST00000603753 252 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AL670379.11-201ENST00000604059 253 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AL670379.10-201ENST00000604330 253 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AC008162.1-201ENST00000604718 254 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AL670379.1-201ENST00000604752 252 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AL670379.2-201ENST00000604983 252 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AL670379.5-201ENST00000605253 252 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AL670379.4-201ENST00000605279 254 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AL670379.12-201ENST00000605291 253 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AL670379.8-201ENST00000605353 252 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AL670379.9-201ENST00000605428 253 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AL670379.7-201ENST00000605823 252 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 Y_RNA.783-201ENST00000613546 102 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AC073348.1-201ENST00000623002 331 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 AC048347.1-201ENST00000624621 427 ntBASIC2.48□□□□□ -2.01
UBR3Q6ZT12 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
UBR3Q6ZT12 RPL23AP39-201ENST00000415533 405 ntBASIC2.47□□□□□ -2.01
UBR3Q6ZT12 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.47□□□□□ -2.01
UBR3Q6ZT12 AC243772.1-201ENST00000451620 410 ntBASIC2.47□□□□□ -2.01
UBR3Q6ZT12 AP000705.1-201ENST00000454567 350 ntBASIC2.47□□□□□ -2.01
UBR3Q6ZT12 HMGB1P1-201ENST00000522557 636 ntBASIC2.47□□□□□ -2.01
UBR3Q6ZT12 AP000889.2-201ENST00000532684 490 ntBASIC2.47□□□□□ -2.01
UBR3Q6ZT12 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.47□□□□□ -2.01
UBR3Q6ZT12 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.47□□□□□ -2.01
UBR3Q6ZT12 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.46□□□□□ -2.02
UBR3Q6ZT12 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.46□□□□□ -2.02
UBR3Q6ZT12 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.46□□□□□ -2.02
UBR3Q6ZT12 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.46□□□□□ -2.02
UBR3Q6ZT12 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.46□□□□□ -2.02
UBR3Q6ZT12 AL356280.1-201ENST00000603614 379 ntBASIC2.46□□□□□ -2.02
UBR3Q6ZT12 SNRPGP19-201ENST00000603826 189 ntBASIC2.46□□□□□ -2.02
UBR3Q6ZT12 AC004943.3-201ENST00000624116 600 ntBASIC2.46□□□□□ -2.02
UBR3Q6ZT12 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
UBR3Q6ZT12 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
UBR3Q6ZT12 RNU6-146P-201ENST00000384602 108 ntBASIC2.45□□□□□ -2.02
UBR3Q6ZT12 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.45□□□□□ -2.02
UBR3Q6ZT12 AL353093.1-201ENST00000441292 436 ntBASIC2.45□□□□□ -2.02
UBR3Q6ZT12 RPL23AP76-201ENST00000441860 458 ntBASIC2.45□□□□□ -2.02
UBR3Q6ZT12 TRAV31-201ENST00000502780 342 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms