Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AL137792.2-201ENST00000443484 235 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 Y_RNA.653-201ENST00000459091 95 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 RPL35AP28-201ENST00000459730 331 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 ST13P14-201ENST00000474095 734 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 RPL7P43-201ENST00000478876 753 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 RN7SL30P-201ENST00000488416 306 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 SCARNA21.2-201ENST00000516600 166 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 RNU6-1137P-201ENST00000517073 99 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AC027308.1-201ENST00000517993 110 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 COX6CP5-201ENST00000527162 228 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 PTP4A1P6-201ENST00000531034 478 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 OR5D15P-201ENST00000531671 942 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AC005868.1-201ENST00000536421 331 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AC063949.1-201ENST00000552900 865 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AC123786.2-201ENST00000603459 275 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AP000654.2-201ENST00000605633 586 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AC090425.1-201ENST00000610007 140 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AC025034.2-201ENST00000623264 286 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 NXPH1-205ENST00000602349 1953 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AL122126.1-201ENST00000546905 1318 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AL022322.2-201ENST00000624072 20397 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 SNORD115-7-201ENST00000365306 82 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 RNU6-907P-201ENST00000390924 102 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AL121834.1-202ENST00000404494 277 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 RPL31P12-201ENST00000422587 358 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AC108059.2-201ENST00000434626 151 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AL161722.2-201ENST00000434731 981 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 RN7SL172P-201ENST00000460535 303 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AC079804.1-201ENST00000461922 436 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 RPS4XP20-201ENST00000505751 772 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AC016065.2-201ENST00000514530 444 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 RNA5SP454-201ENST00000517231 127 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AC012400.1-201ENST00000518452 381 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AC090136.1-201ENST00000520009 240 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AC124068.1-201ENST00000563131 678 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 MIR4503-201ENST00000582187 83 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AC092747.3-201ENST00000603769 301 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AC104662.1-201ENST00000604448 511 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AC123768.4-201ENST00000616244 701 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AC074140.1-201ENST00000621617 208 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 AC092747.4-201ENST00000620519 1861 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
RNF111Q6ZNA4 PABPC1P6-201ENST00000445594 1829 ntBASIC4.9□□□□□ -1.62
RNF111Q6ZNA4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
RNF111Q6ZNA4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
RNF111Q6ZNA4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
RNF111Q6ZNA4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
RNF111Q6ZNA4 AC097461.1-201ENST00000568928 2821 ntBASIC4.9□□□□□ -1.62
RNF111Q6ZNA4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
RNF111Q6ZNA4 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms