Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.77□□□□□ -1.97
NUP188Q5SRE5 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.77□□□□□ -1.97
NUP188Q5SRE5 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.77□□□□□ -1.97
NUP188Q5SRE5 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.77□□□□□ -1.97
NUP188Q5SRE5 AC002064.3-201ENST00000623448 346 ntBASIC2.77□□□□□ -1.97
NUP188Q5SRE5 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.77□□□□□ -1.97
NUP188Q5SRE5 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NUP188Q5SRE5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
NUP188Q5SRE5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.77□□□□□ -1.97
NUP188Q5SRE5 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.77□□□□□ -1.97
NUP188Q5SRE5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.77□□□□□ -1.97
NUP188Q5SRE5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
NUP188Q5SRE5 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC2.77□□□□□ -1.97
NUP188Q5SRE5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.77□□□□□ -1.97
NUP188Q5SRE5 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.76□□□□□ -1.97
NUP188Q5SRE5 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
NUP188Q5SRE5 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.76□□□□□ -1.97
NUP188Q5SRE5 AC091046.2-201ENST00000620775 665 ntBASIC2.76□□□□□ -1.97
NUP188Q5SRE5 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.76□□□□□ -1.97
NUP188Q5SRE5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NUP188Q5SRE5 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.76□□□□□ -1.97
NUP188Q5SRE5 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC2.76□□□□□ -1.97
NUP188Q5SRE5 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.76□□□□□ -1.97
NUP188Q5SRE5 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NUP188Q5SRE5 CCNHP1-201ENST00000513311 678 ntBASIC2.76□□□□□ -1.97
NUP188Q5SRE5 IGHV3-76-201ENST00000522465 295 ntBASIC2.76□□□□□ -1.97
NUP188Q5SRE5 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.76□□□□□ -1.97
NUP188Q5SRE5 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.76□□□□□ -1.97
NUP188Q5SRE5 AC009452.1-201ENST00000640823 606 ntBASIC2.76□□□□□ -1.97
NUP188Q5SRE5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
NUP188Q5SRE5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
NUP188Q5SRE5 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NUP188Q5SRE5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NUP188Q5SRE5 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
NUP188Q5SRE5 RNU6-661P-201ENST00000362409 107 ntBASIC2.75□□□□□ -1.97
NUP188Q5SRE5 RNA5SP344-201ENST00000411081 104 ntBASIC2.75□□□□□ -1.97
NUP188Q5SRE5 BTF3P4-201ENST00000418852 495 ntBASIC2.75□□□□□ -1.97
NUP188Q5SRE5 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.75□□□□□ -1.97
NUP188Q5SRE5 RNA5SP490-201ENST00000517141 136 ntBASIC2.75□□□□□ -1.97
NUP188Q5SRE5 AC093591.3-201ENST00000634516 308 ntBASIC2.75□□□□□ -1.97
NUP188Q5SRE5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.75□□□□□ -1.97
NUP188Q5SRE5 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NUP188Q5SRE5 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NUP188Q5SRE5 AC027514.1-201ENST00000588561 1603 ntBASIC2.74□□□□□ -1.97
NUP188Q5SRE5 RN7SKP226-201ENST00000364912 300 ntBASIC2.74□□□□□ -1.97
NUP188Q5SRE5 AP1B1P2-201ENST00000416196 106 ntBASIC2.74□□□□□ -1.97
NUP188Q5SRE5 AL096701.2-201ENST00000416920 238 ntBASIC2.74□□□□□ -1.97
NUP188Q5SRE5 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.74□□□□□ -1.97
NUP188Q5SRE5 TRAV31-201ENST00000502780 342 ntBASIC2.74□□□□□ -1.97
NUP188Q5SRE5 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.74□□□□□ -1.97
NUP188Q5SRE5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
NUP188Q5SRE5 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.73□□□□□ -1.97
NUP188Q5SRE5 AC110588.1-201ENST00000559699 137 ntBASIC2.73□□□□□ -1.97
NUP188Q5SRE5 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.73□□□□□ -1.97
NUP188Q5SRE5 AC091953.2-201ENST00000623979 160 ntBASIC2.73□□□□□ -1.97
NUP188Q5SRE5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NUP188Q5SRE5 AL445646.1-201ENST00000431784 216 ntBASIC2.73□□□□□ -1.97
NUP188Q5SRE5 AC239798.3-201ENST00000454459 408 ntBASIC2.73□□□□□ -1.97
NUP188Q5SRE5 AL163540.1-201ENST00000485382 386 ntBASIC2.73□□□□□ -1.97
NUP188Q5SRE5 AC140059.1-201ENST00000489238 361 ntBASIC2.73□□□□□ -1.97
NUP188Q5SRE5 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.73□□□□□ -1.97
NUP188Q5SRE5 DNAJC19P9-201ENST00000555084 351 ntBASIC2.73□□□□□ -1.97
NUP188Q5SRE5 NF1P5-201ENST00000588287 448 ntBASIC2.73□□□□□ -1.97
NUP188Q5SRE5 AC020895.1-201ENST00000595362 272 ntBASIC2.73□□□□□ -1.97
NUP188Q5SRE5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NUP188Q5SRE5 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
NUP188Q5SRE5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.72□□□□□ -1.97
NUP188Q5SRE5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NUP188Q5SRE5 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
NUP188Q5SRE5 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.72□□□□□ -1.97
NUP188Q5SRE5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.72□□□□□ -1.97
NUP188Q5SRE5 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.72□□□□□ -1.97
NUP188Q5SRE5 AC003989.2-201ENST00000440224 169 ntBASIC2.72□□□□□ -1.97
NUP188Q5SRE5 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.72□□□□□ -1.97
NUP188Q5SRE5 AC008571.1-201ENST00000467232 300 ntBASIC2.72□□□□□ -1.97
NUP188Q5SRE5 TRMT112P2-201ENST00000512910 132 ntBASIC2.72□□□□□ -1.97
NUP188Q5SRE5 AC025881.1-201ENST00000518851 512 ntBASIC2.72□□□□□ -1.97
NUP188Q5SRE5 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.72□□□□□ -1.97
NUP188Q5SRE5 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.72□□□□□ -1.97
NUP188Q5SRE5 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.72□□□□□ -1.97
NUP188Q5SRE5 XIST_intron.1-201ENST00000619444 68 ntBASIC2.72□□□□□ -1.97
NUP188Q5SRE5 AL589994.2-201ENST00000621124 579 ntBASIC2.72□□□□□ -1.97
NUP188Q5SRE5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NUP188Q5SRE5 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NUP188Q5SRE5 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
NUP188Q5SRE5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NUP188Q5SRE5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NUP188Q5SRE5 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.71□□□□□ -1.98
NUP188Q5SRE5 OR4T1P-201ENST00000554933 911 ntBASIC2.71□□□□□ -1.98
NUP188Q5SRE5 SUB1P3-201ENST00000564581 315 ntBASIC2.71□□□□□ -1.98
NUP188Q5SRE5 AL451074.6-201ENST00000608512 729 ntBASIC2.71□□□□□ -1.98
NUP188Q5SRE5 AC010297.1-201ENST00000623948 149 ntBASIC2.71□□□□□ -1.98
NUP188Q5SRE5 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
NUP188Q5SRE5 AC092447.7-201ENST00000422212 1621 ntBASIC2.71□□□□□ -1.98
NUP188Q5SRE5 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NUP188Q5SRE5 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NUP188Q5SRE5 Y_RNA.224-201ENST00000364308 111 ntBASIC2.71□□□□□ -1.98
NUP188Q5SRE5 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.71□□□□□ -1.98
NUP188Q5SRE5 AC106901.1-201ENST00000425086 698 ntBASIC2.71□□□□□ -1.98
NUP188Q5SRE5 MTCO3P21-201ENST00000430791 643 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms