Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 HMGB3P2-201ENST00000411913 584 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 AL512504.1-201ENST00000415494 778 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 BTF3P9-201ENST00000418784 283 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC58Q4VC31 AC114973.1-201ENST00000429057 632 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 SNORA84-201ENST00000459229 133 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 AC090255.1-201ENST00000495779 349 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 AC008427.1-201ENST00000503102 655 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 HMGB1P46-201ENST00000520062 610 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 CKS1BP7-201ENST00000522230 235 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC58Q4VC31 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.22□□□□□ -2.05
CCDC58Q4VC31 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC58Q4VC31 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.22□□□□□ -2.05
CCDC58Q4VC31 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.22□□□□□ -2.05
CCDC58Q4VC31 NRBF2P5-201ENST00000603087 788 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 AL356280.1-201ENST00000603614 379 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 AL035413.2-201ENST00000604801 525 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 ATP5A1P2-202ENST00000616464 443 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 AC092650.2-201ENST00000619984 902 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 MIR8057-201ENST00000620957 69 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 U4.3-201ENST00000621047 82 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 AP000553.5-201ENST00000641933 54 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC58Q4VC31 CKAP2P1-201ENST00000555477 2049 ntBASIC2.22□□□□□ -2.05
CCDC58Q4VC31 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.22□□□□□ -2.05
CCDC58Q4VC31 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC58Q4VC31 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
CCDC58Q4VC31 AL356057.3-201ENST00000402607 340 ntBASIC2.21□□□□□ -2.06
CCDC58Q4VC31 RPS3AP25-201ENST00000411660 793 ntBASIC2.21□□□□□ -2.06
CCDC58Q4VC31 AL024507.1-201ENST00000412741 274 ntBASIC2.21□□□□□ -2.06
CCDC58Q4VC31 MTCO3P12-201ENST00000416718 547 ntBASIC2.21□□□□□ -2.06
CCDC58Q4VC31 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC58Q4VC31 YME1L1P1-201ENST00000429435 297 ntBASIC2.21□□□□□ -2.06
CCDC58Q4VC31 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC58Q4VC31 RPS24P13-201ENST00000442520 397 ntBASIC2.21□□□□□ -2.06
CCDC58Q4VC31 HMGB1P48-201ENST00000446155 598 ntBASIC2.21□□□□□ -2.06
CCDC58Q4VC31 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC58Q4VC31 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC58Q4VC31 FTH1P2-201ENST00000466086 412 ntBASIC2.21□□□□□ -2.06
CCDC58Q4VC31 RPL23AP45-201ENST00000476406 468 ntBASIC2.21□□□□□ -2.06
CCDC58Q4VC31 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC58Q4VC31 AC004944.1-201ENST00000517807 3059 ntBASIC2.21□□□□□ -2.06
CCDC58Q4VC31 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC58Q4VC31 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC58Q4VC31 AP002812.4-201ENST00000532139 286 ntBASIC2.21□□□□□ -2.06
CCDC58Q4VC31 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.21□□□□□ -2.06
CCDC58Q4VC31 RPL23AP84-201ENST00000571193 464 ntBASIC2.21□□□□□ -2.06
CCDC58Q4VC31 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC58Q4VC31 OR1M4P-201ENST00000589199 287 ntBASIC2.21□□□□□ -2.06
CCDC58Q4VC31 AC079880.2-201ENST00000603790 1213 ntBASIC2.21□□□□□ -2.06
CCDC58Q4VC31 MIR6075-201ENST00000620782 95 ntBASIC2.21□□□□□ -2.06
CCDC58Q4VC31 AL031601.2-202ENST00000622650 282 ntBASIC2.21□□□□□ -2.06
CCDC58Q4VC31 AC068880.5-201ENST00000624331 290 ntBASIC2.21□□□□□ -2.06
CCDC58Q4VC31 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CCDC58Q4VC31 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC58Q4VC31 AC009902.3-201ENST00000606235 2172 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC58Q4VC31 SGO1P2-201ENST00000429458 1589 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC58Q4VC31 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CCDC58Q4VC31 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CCDC58Q4VC31 SNORD62.1-201ENST00000362541 86 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC58Q4VC31 SFR1P1-201ENST00000403720 688 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 FNDC3CP-201ENST00000420795 1155 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 RPL7P30-201ENST00000420888 709 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC58Q4VC31 OR4K11P-201ENST00000431829 904 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 NDUFA5P10-201ENST00000432147 357 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 AL135938.1-201ENST00000443141 297 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 AC009296.1-201ENST00000443146 155 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 TPTE2P6-202ENST00000445572 1007 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 BX510359.1-201ENST00000456973 237 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC58Q4VC31 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC58Q4VC31 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC58Q4VC31 AC096725.1-201ENST00000514266 313 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 AP003467.2-201ENST00000520175 319 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 AP001804.3-201ENST00000525146 880 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC58Q4VC31 CKS1BP1-201ENST00000555221 240 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 MIR4444-1-201ENST00000581696 74 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 MIR4444-2-201ENST00000584390 74 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 U6.48-201ENST00000618523 106 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 AL731566.2-201ENST00000618971 317 ntBASIC2.2□□□□□ -2.06
CCDC58Q4VC31 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC58Q4VC31 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC58Q4VC31 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC58Q4VC31 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC58Q4VC31 SNORA71.3-201ENST00000362582 128 ntBASIC2.19□□□□□ -2.06
CCDC58Q4VC31 RNU4-52P-201ENST00000384209 138 ntBASIC2.19□□□□□ -2.06
CCDC58Q4VC31 AL360182.1-201ENST00000397433 468 ntBASIC2.19□□□□□ -2.06
CCDC58Q4VC31 AL355497.1-201ENST00000406262 551 ntBASIC2.19□□□□□ -2.06
CCDC58Q4VC31 AL356967.1-201ENST00000406305 431 ntBASIC2.19□□□□□ -2.06
CCDC58Q4VC31 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC58Q4VC31 AL592148.1-201ENST00000413568 445 ntBASIC2.19□□□□□ -2.06
CCDC58Q4VC31 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms