Protein–RNA interactions for Protein: Q2M1V0

ISX, Intestine-specific homeobox, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ISXQ2M1V0 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.18□□□□□ -1.9
ISXQ2M1V0 AC093424.1-201ENST00000604999 338 ntBASIC3.18□□□□□ -1.9
ISXQ2M1V0 AL592148.2-201ENST00000612210 372 ntBASIC3.18□□□□□ -1.9
ISXQ2M1V0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.18□□□□□ -1.9
ISXQ2M1V0 AC109809.1-201ENST00000619665 545 ntBASIC3.18□□□□□ -1.9
ISXQ2M1V0 AC109454.4-201ENST00000623411 649 ntBASIC3.18□□□□□ -1.9
ISXQ2M1V0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.18□□□□□ -1.9
ISXQ2M1V0 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.18□□□□□ -1.9
ISXQ2M1V0 MFSD8-245ENST00000641743 948 ntBASIC3.18□□□□□ -1.9
ISXQ2M1V0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
ISXQ2M1V0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ISXQ2M1V0 AP001350.1-201ENST00000601906 1524 ntBASIC3.18□□□□□ -1.9
ISXQ2M1V0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
ISXQ2M1V0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
ISXQ2M1V0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
ISXQ2M1V0 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.18□□□□□ -1.9
ISXQ2M1V0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC092326.2-201ENST00000624772 1561 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ISXQ2M1V0 RNU1-75P-201ENST00000347264 129 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 RNU6-600P-201ENST00000362524 99 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 snoZ40.1-201ENST00000364540 72 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 RNU1-140P-201ENST00000365040 165 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 SNORD116.1-201ENST00000365628 92 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 RPL5P18-201ENST00000406671 891 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 RNA5SP31-201ENST00000411144 127 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC007899.1-201ENST00000412776 775 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 Z99755.1-201ENST00000414048 380 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 Z75741.2-201ENST00000417272 1167 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ISXQ2M1V0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 TRBV26-201ENST00000456572 344 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 AL139824.2-201ENST00000458731 1095 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 GAPDHP39-201ENST00000481866 979 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 RPS4XP13-201ENST00000483219 789 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC080014.1-201ENST00000496877 1201 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC097462.2-201ENST00000504623 481 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC048346.1-201ENST00000510247 144 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ISXQ2M1V0 LRRC34P1-201ENST00000542742 915 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC011602.1-201ENST00000546484 331 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC005476.1-201ENST00000554427 397 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC016877.3-201ENST00000606778 504 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC013470.4-201ENST00000619978 986 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 AL356321.1-201ENST00000621360 228 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC011330.2-201ENST00000621680 635 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC098679.5-201ENST00000624394 571 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 OR1S1-201ENST00000624470 978 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC087821.2-201ENST00000637086 450 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC005183.1-201ENST00000603687 1979 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
ISXQ2M1V0 AF127577.6-201ENST00000623352 2191 ntBASIC3.17□□□□□ -1.9
ISXQ2M1V0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
ISXQ2M1V0 AC117529.2-201ENST00000512159 2068 ntBASIC3.16□□□□□ -1.9
ISXQ2M1V0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
ISXQ2M1V0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
ISXQ2M1V0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ISXQ2M1V0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
ISXQ2M1V0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
ISXQ2M1V0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.16□□□□□ -1.9
ISXQ2M1V0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
ISXQ2M1V0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ISXQ2M1V0 CR383658.2-201ENST00000547576 1525 ntBASIC3.16□□□□□ -1.9
ISXQ2M1V0 MIR30E-201ENST00000362104 92 ntBASIC3.16□□□□□ -1.9
ISXQ2M1V0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ISXQ2M1V0 RNU6-636P-201ENST00000384598 107 ntBASIC3.16□□□□□ -1.9
ISXQ2M1V0 SKINT1L-201ENST00000401057 817 ntBASIC3.16□□□□□ -1.9
ISXQ2M1V0 AL023807.1-201ENST00000407932 359 ntBASIC3.16□□□□□ -1.9
ISXQ2M1V0 RNA5SP56-201ENST00000410277 118 ntBASIC3.16□□□□□ -1.9
ISXQ2M1V0 AL133384.1-201ENST00000412744 351 ntBASIC3.16□□□□□ -1.9
ISXQ2M1V0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms