Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 ZNF37BP-203ENST00000452306 1352 ntBASIC2.29□□□□□ -2.04
FOXF1Q12946 MTND4P21-201ENST00000453886 1357 ntBASIC2.29□□□□□ -2.04
FOXF1Q12946 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.29□□□□□ -2.04
FOXF1Q12946 RNU6-543P-201ENST00000362576 108 ntBASIC2.29□□□□□ -2.04
FOXF1Q12946 AL121972.1-201ENST00000402023 252 ntBASIC2.29□□□□□ -2.04
FOXF1Q12946 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.29□□□□□ -2.04
FOXF1Q12946 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.29□□□□□ -2.04
FOXF1Q12946 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.29□□□□□ -2.04
FOXF1Q12946 HSPE1P1-201ENST00000421494 318 ntBASIC2.29□□□□□ -2.04
FOXF1Q12946 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.29□□□□□ -2.04
FOXF1Q12946 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.29□□□□□ -2.04
FOXF1Q12946 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.29□□□□□ -2.04
FOXF1Q12946 AC109583.1-201ENST00000432156 268 ntBASIC2.29□□□□□ -2.04
FOXF1Q12946 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.29□□□□□ -2.04
FOXF1Q12946 ELOCP13-201ENST00000443934 329 ntBASIC2.29□□□□□ -2.04
FOXF1Q12946 AC027673.1-201ENST00000456245 405 ntBASIC2.29□□□□□ -2.04
FOXF1Q12946 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.29□□□□□ -2.04
FOXF1Q12946 RPL23AP55-201ENST00000498163 452 ntBASIC2.29□□□□□ -2.04
FOXF1Q12946 MTND5P4-201ENST00000514978 288 ntBASIC2.29□□□□□ -2.04
FOXF1Q12946 SNORD59.2-201ENST00000516873 68 ntBASIC2.29□□□□□ -2.04
FOXF1Q12946 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.29□□□□□ -2.04
FOXF1Q12946 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.29□□□□□ -2.04
FOXF1Q12946 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.29□□□□□ -2.04
FOXF1Q12946 MIR5092-201ENST00000583139 88 ntBASIC2.29□□□□□ -2.04
FOXF1Q12946 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.29□□□□□ -2.04
FOXF1Q12946 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.29□□□□□ -2.04
FOXF1Q12946 MIR1264-201ENST00000616374 69 ntBASIC2.29□□□□□ -2.04
FOXF1Q12946 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
FOXF1Q12946 SEC63P2-201ENST00000503863 1939 ntBASIC2.29□□□□□ -2.04
FOXF1Q12946 MTCO1P18-201ENST00000455518 1419 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.28□□□□□ -2.04
FOXF1Q12946 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
FOXF1Q12946 RNU6-1181P-201ENST00000384191 106 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 Y_RNA.510-201ENST00000384511 114 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 MIR634-201ENST00000385208 97 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
FOXF1Q12946 RPS4XP8-201ENST00000402039 771 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 SFR1P1-201ENST00000403720 688 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 AL162578.1-201ENST00000406202 378 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 AC092745.2-202ENST00000411880 369 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.28□□□□□ -2.04
FOXF1Q12946 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.28□□□□□ -2.04
FOXF1Q12946 RPL7P52-201ENST00000449200 742 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 AC009961.3-201ENST00000449832 765 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 RPS3P1-201ENST00000456781 192 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 SYPL1P1-201ENST00000473622 768 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.28□□□□□ -2.04
FOXF1Q12946 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.28□□□□□ -2.04
FOXF1Q12946 ARL4AP2-201ENST00000507378 601 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 AC008885.2-201ENST00000509506 930 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.28□□□□□ -2.04
FOXF1Q12946 RN7SKP24-201ENST00000515888 284 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 RNU4-29P-201ENST00000515943 174 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.28□□□□□ -2.04
FOXF1Q12946 AC083923.1-201ENST00000523708 376 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 AL731537.2-201ENST00000561565 951 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 AC234778.2-201ENST00000566241 354 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 AC006023.1-201ENST00000603944 259 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 KATNBL1P5-201ENST00000605015 517 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 MIR6817-201ENST00000615588 66 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.28□□□□□ -2.04
FOXF1Q12946 AC024595.1-201ENST00000623088 387 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 SCARNA15.3-201ENST00000626315 122 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 SCARNA4.1-201ENST00000628597 123 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.28□□□□□ -2.04
FOXF1Q12946 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.28□□□□□ -2.04
FOXF1Q12946 AL136360.1-201ENST00000503377 1900 ntBASIC2.28□□□□□ -2.04
FOXF1Q12946 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
FOXF1Q12946 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.27□□□□□ -2.05
FOXF1Q12946 ENSAP3-201ENST00000312710 333 ntBASIC2.27□□□□□ -2.05
FOXF1Q12946 RNU6-1243P-201ENST00000364028 107 ntBASIC2.27□□□□□ -2.05
FOXF1Q12946 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.27□□□□□ -2.05
FOXF1Q12946 MIR27B-201ENST00000385129 97 ntBASIC2.27□□□□□ -2.05
FOXF1Q12946 MIR23A-201ENST00000385245 73 ntBASIC2.27□□□□□ -2.05
FOXF1Q12946 RPL21P75-201ENST00000396599 483 ntBASIC2.27□□□□□ -2.05
FOXF1Q12946 RPS3AP26-201ENST00000398259 784 ntBASIC2.27□□□□□ -2.05
FOXF1Q12946 RPL21P28-201ENST00000401418 483 ntBASIC2.27□□□□□ -2.05
FOXF1Q12946 AL592114.1-201ENST00000403842 483 ntBASIC2.27□□□□□ -2.05
FOXF1Q12946 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.27□□□□□ -2.05
FOXF1Q12946 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.27□□□□□ -2.05
FOXF1Q12946 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.27□□□□□ -2.05
FOXF1Q12946 RPL21P66-201ENST00000426566 466 ntBASIC2.27□□□□□ -2.05
FOXF1Q12946 AC093422.3-201ENST00000428506 305 ntBASIC2.27□□□□□ -2.05
FOXF1Q12946 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
FOXF1Q12946 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.27□□□□□ -2.05
FOXF1Q12946 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.27□□□□□ -2.05
FOXF1Q12946 RPS26P56-201ENST00000444468 240 ntBASIC2.27□□□□□ -2.05
FOXF1Q12946 RPL21P39-201ENST00000463605 483 ntBASIC2.27□□□□□ -2.05
FOXF1Q12946 AC011979.1-201ENST00000472300 483 ntBASIC2.27□□□□□ -2.05
FOXF1Q12946 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
FOXF1Q12946 RPL21P93-201ENST00000480465 489 ntBASIC2.27□□□□□ -2.05
FOXF1Q12946 AC233702.1-201ENST00000482905 502 ntBASIC2.27□□□□□ -2.05
FOXF1Q12946 AC093591.1-201ENST00000491435 481 ntBASIC2.27□□□□□ -2.05
FOXF1Q12946 RPL21P16-201ENST00000495531 483 ntBASIC2.27□□□□□ -2.05
FOXF1Q12946 AC098799.1-201ENST00000504752 800 ntBASIC2.27□□□□□ -2.05
FOXF1Q12946 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.27□□□□□ -2.05
FOXF1Q12946 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.27□□□□□ -2.05
FOXF1Q12946 RNA5SP148-201ENST00000516527 94 ntBASIC2.27□□□□□ -2.05
FOXF1Q12946 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
FOXF1Q12946 AP004371.1-201ENST00000525240 214 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms