Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.11□□□□□ -2.07
UBA52P62987 AC112220.1-201ENST00000434628 355 ntBASIC2.11□□□□□ -2.07
UBA52P62987 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.11□□□□□ -2.07
UBA52P62987 FDX1P2-201ENST00000450769 375 ntBASIC2.11□□□□□ -2.07
UBA52P62987 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.11□□□□□ -2.07
UBA52P62987 SNORA31.1-201ENST00000515993 133 ntBASIC2.11□□□□□ -2.07
UBA52P62987 SNORA31.5-201ENST00000516190 133 ntBASIC2.11□□□□□ -2.07
UBA52P62987 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.11□□□□□ -2.07
UBA52P62987 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.11□□□□□ -2.07
UBA52P62987 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
UBA52P62987 AL391156.1-201ENST00000554965 554 ntBASIC2.11□□□□□ -2.07
UBA52P62987 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.11□□□□□ -2.07
UBA52P62987 AC027176.1-201ENST00000560204 514 ntBASIC2.11□□□□□ -2.07
UBA52P62987 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.11□□□□□ -2.07
UBA52P62987 AC020895.1-201ENST00000595362 272 ntBASIC2.11□□□□□ -2.07
UBA52P62987 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.11□□□□□ -2.07
UBA52P62987 AC079089.3-201ENST00000603094 673 ntBASIC2.11□□□□□ -2.07
UBA52P62987 AC007621.1-201ENST00000604544 437 ntBASIC2.11□□□□□ -2.07
UBA52P62987 AC113194.1-201ENST00000606037 500 ntBASIC2.11□□□□□ -2.07
UBA52P62987 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
UBA52P62987 AC016542.2-201ENST00000624201 619 ntBASIC2.11□□□□□ -2.07
UBA52P62987 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.11□□□□□ -2.07
UBA52P62987 ZNF658B-202ENST00000615961 3375 ntBASIC2.1□□□□□ -2.07
UBA52P62987 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
UBA52P62987 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
UBA52P62987 RNU6-799P-201ENST00000363567 107 ntBASIC2.1□□□□□ -2.07
UBA52P62987 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
UBA52P62987 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
UBA52P62987 SNORA3.2-201ENST00000408221 125 ntBASIC2.1□□□□□ -2.07
UBA52P62987 MORF4L1P6-201ENST00000418771 268 ntBASIC2.1□□□□□ -2.07
UBA52P62987 YPEL5P1-201ENST00000419731 367 ntBASIC2.1□□□□□ -2.07
UBA52P62987 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.1□□□□□ -2.07
UBA52P62987 CKS1BP5-201ENST00000434172 273 ntBASIC2.1□□□□□ -2.07
UBA52P62987 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.1□□□□□ -2.07
UBA52P62987 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.1□□□□□ -2.07
UBA52P62987 RPL23AP33-201ENST00000442301 452 ntBASIC2.1□□□□□ -2.07
UBA52P62987 ARL5AP2-201ENST00000444698 533 ntBASIC2.1□□□□□ -2.07
UBA52P62987 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.1□□□□□ -2.07
UBA52P62987 snoU13.26-201ENST00000459452 105 ntBASIC2.1□□□□□ -2.07
UBA52P62987 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.1□□□□□ -2.07
UBA52P62987 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
UBA52P62987 RNA5SP282-201ENST00000516355 108 ntBASIC2.1□□□□□ -2.07
UBA52P62987 AP003467.2-201ENST00000520175 319 ntBASIC2.1□□□□□ -2.07
UBA52P62987 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.1□□□□□ -2.07
UBA52P62987 AP003122.3-201ENST00000526316 255 ntBASIC2.1□□□□□ -2.07
UBA52P62987 AP000790.1-201ENST00000528891 737 ntBASIC2.1□□□□□ -2.07
UBA52P62987 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
UBA52P62987 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.1□□□□□ -2.07
UBA52P62987 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
UBA52P62987 DNAJC19P3-201ENST00000594491 331 ntBASIC2.1□□□□□ -2.07
UBA52P62987 MIR7843-201ENST00000622274 79 ntBASIC2.1□□□□□ -2.07
UBA52P62987 AC103798.2-201ENST00000624292 632 ntBASIC2.1□□□□□ -2.07
UBA52P62987 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.1□□□□□ -2.07
UBA52P62987 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.1□□□□□ -2.07
UBA52P62987 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
UBA52P62987 AP001350.1-201ENST00000601906 1524 ntBASIC2.09□□□□□ -2.07
UBA52P62987 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
UBA52P62987 SNORA36C-201ENST00000384289 132 ntBASIC2.09□□□□□ -2.07
UBA52P62987 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
UBA52P62987 RN7SKP192-201ENST00000411291 327 ntBASIC2.09□□□□□ -2.07
UBA52P62987 AC092447.6-201ENST00000414578 210 ntBASIC2.09□□□□□ -2.07
UBA52P62987 FNDC3CP-201ENST00000420795 1155 ntBASIC2.09□□□□□ -2.07
UBA52P62987 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.09□□□□□ -2.07
UBA52P62987 MTCO2P17-201ENST00000424336 677 ntBASIC2.09□□□□□ -2.07
UBA52P62987 WARS2P1-201ENST00000429678 537 ntBASIC2.09□□□□□ -2.07
UBA52P62987 AC011816.1-201ENST00000441346 546 ntBASIC2.09□□□□□ -2.07
UBA52P62987 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.09□□□□□ -2.07
UBA52P62987 CDC42P4-201ENST00000510507 563 ntBASIC2.09□□□□□ -2.07
UBA52P62987 AC008716.1-201ENST00000511084 513 ntBASIC2.09□□□□□ -2.07
UBA52P62987 RNU6-1073P-201ENST00000517182 106 ntBASIC2.09□□□□□ -2.07
UBA52P62987 RNU1-104P-201ENST00000517280 175 ntBASIC2.09□□□□□ -2.07
UBA52P62987 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.09□□□□□ -2.07
UBA52P62987 AC109329.2-201ENST00000519658 482 ntBASIC2.09□□□□□ -2.07
UBA52P62987 CKS1BP7-201ENST00000522230 235 ntBASIC2.09□□□□□ -2.07
UBA52P62987 OSBPL9P3-201ENST00000534523 595 ntBASIC2.09□□□□□ -2.07
UBA52P62987 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.09□□□□□ -2.07
UBA52P62987 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.09□□□□□ -2.07
UBA52P62987 ISCA1P3-201ENST00000577104 373 ntBASIC2.09□□□□□ -2.07
UBA52P62987 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.09□□□□□ -2.07
UBA52P62987 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.09□□□□□ -2.07
UBA52P62987 AL161734.1-201ENST00000609720 557 ntBASIC2.09□□□□□ -2.07
UBA52P62987 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
UBA52P62987 AC008083.4-201ENST00000615076 444 ntBASIC2.09□□□□□ -2.07
UBA52P62987 AC007275.1-201ENST00000621243 671 ntBASIC2.09□□□□□ -2.07
UBA52P62987 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.08
UBA52P62987 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
UBA52P62987 CUL1P1-201ENST00000509510 2425 ntBASIC2.08□□□□□ -2.08
UBA52P62987 MIR504-201ENST00000385065 83 ntBASIC2.08□□□□□ -2.08
UBA52P62987 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.08□□□□□ -2.08
UBA52P62987 AC009963.1-201ENST00000417265 157 ntBASIC2.08□□□□□ -2.08
UBA52P62987 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.08□□□□□ -2.08
UBA52P62987 AC110792.2-201ENST00000510278 224 ntBASIC2.08□□□□□ -2.08
UBA52P62987 AC112673.1-201ENST00000513168 575 ntBASIC2.08□□□□□ -2.08
UBA52P62987 RNU6-237P-201ENST00000515985 71 ntBASIC2.08□□□□□ -2.08
UBA52P62987 NOP56P3-201ENST00000549457 385 ntBASIC2.08□□□□□ -2.08
UBA52P62987 CKS1BP1-201ENST00000555221 240 ntBASIC2.08□□□□□ -2.08
UBA52P62987 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.08□□□□□ -2.08
UBA52P62987 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.08□□□□□ -2.08
UBA52P62987 CRYM-AS1-204ENST00000637983 556 ntBASIC2.08□□□□□ -2.08
UBA52P62987 ZNF720P1-201ENST00000562403 1939 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms