Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VSX2P58304 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.83□□□□□ -1.96
VSX2P58304 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.83□□□□□ -1.96
VSX2P58304 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VSX2P58304 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.82□□□□□ -1.96
VSX2P58304 AC092435.3-201ENST00000565538 3654 ntBASIC2.82□□□□□ -1.96
VSX2P58304 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VSX2P58304 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
VSX2P58304 RNU5B-1-201ENST00000363286 116 ntBASIC2.82□□□□□ -1.96
VSX2P58304 RNVU1-3-201ENST00000364313 161 ntBASIC2.82□□□□□ -1.96
VSX2P58304 SNORA46-201ENST00000384762 135 ntBASIC2.82□□□□□ -1.96
VSX2P58304 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
VSX2P58304 RNU1-101P-201ENST00000391171 127 ntBASIC2.82□□□□□ -1.96
VSX2P58304 COTL1P1-201ENST00000422309 375 ntBASIC2.82□□□□□ -1.96
VSX2P58304 RPL21P66-201ENST00000426566 466 ntBASIC2.82□□□□□ -1.96
VSX2P58304 AC002542.1-201ENST00000440683 193 ntBASIC2.82□□□□□ -1.96
VSX2P58304 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.82□□□□□ -1.96
VSX2P58304 RPS24P6-201ENST00000452670 400 ntBASIC2.82□□□□□ -1.96
VSX2P58304 PABPC1P3-201ENST00000469174 459 ntBASIC2.82□□□□□ -1.96
VSX2P58304 RN7SL633P-201ENST00000488974 297 ntBASIC2.82□□□□□ -1.96
VSX2P58304 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.82□□□□□ -1.96
VSX2P58304 AC091860.1-201ENST00000505723 432 ntBASIC2.82□□□□□ -1.96
VSX2P58304 AC118282.2-201ENST00000508739 374 ntBASIC2.82□□□□□ -1.96
VSX2P58304 AC119751.5-201ENST00000514077 770 ntBASIC2.82□□□□□ -1.96
VSX2P58304 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.82□□□□□ -1.96
VSX2P58304 OR5G4P-201ENST00000525251 760 ntBASIC2.82□□□□□ -1.96
VSX2P58304 AC239860.2-201ENST00000525886 270 ntBASIC2.82□□□□□ -1.96
VSX2P58304 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.82□□□□□ -1.96
VSX2P58304 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.82□□□□□ -1.96
VSX2P58304 AL136520.1-202ENST00000555494 763 ntBASIC2.82□□□□□ -1.96
VSX2P58304 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.82□□□□□ -1.96
VSX2P58304 AC023825.1-201ENST00000566704 1030 ntBASIC2.82□□□□□ -1.96
VSX2P58304 AC010653.1-201ENST00000571108 881 ntBASIC2.82□□□□□ -1.96
VSX2P58304 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.82□□□□□ -1.96
VSX2P58304 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.82□□□□□ -1.96
VSX2P58304 AC015871.2-201ENST00000603605 948 ntBASIC2.82□□□□□ -1.96
VSX2P58304 RPAP2P1-201ENST00000603626 1168 ntBASIC2.82□□□□□ -1.96
VSX2P58304 AL137843.1-201ENST00000605078 385 ntBASIC2.82□□□□□ -1.96
VSX2P58304 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VSX2P58304 AC068722.2-201ENST00000618734 544 ntBASIC2.82□□□□□ -1.96
VSX2P58304 VN1R7P-201ENST00000619242 903 ntBASIC2.82□□□□□ -1.96
VSX2P58304 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.82□□□□□ -1.96
VSX2P58304 AC006386.2-201ENST00000624491 75 ntBASIC2.82□□□□□ -1.96
VSX2P58304 AC012005.1-201ENST00000624575 75 ntBASIC2.82□□□□□ -1.96
VSX2P58304 AL137790.1-201ENST00000634283 177 ntBASIC2.82□□□□□ -1.96
VSX2P58304 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VSX2P58304 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.82□□□□□ -1.96
VSX2P58304 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
VSX2P58304 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.82□□□□□ -1.96
VSX2P58304 AP001350.1-201ENST00000601906 1524 ntBASIC2.82□□□□□ -1.96
VSX2P58304 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VSX2P58304 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VSX2P58304 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.82□□□□□ -1.96
VSX2P58304 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
VSX2P58304 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
VSX2P58304 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
VSX2P58304 AL121972.1-201ENST00000402023 252 ntBASIC2.81□□□□□ -1.96
VSX2P58304 AL136133.1-201ENST00000413694 376 ntBASIC2.81□□□□□ -1.96
VSX2P58304 AC027644.1-201ENST00000419595 298 ntBASIC2.81□□□□□ -1.96
VSX2P58304 AC006548.1-201ENST00000427470 102 ntBASIC2.81□□□□□ -1.96
VSX2P58304 OR2AS1P-201ENST00000427827 319 ntBASIC2.81□□□□□ -1.96
VSX2P58304 AL390023.1-201ENST00000428836 262 ntBASIC2.81□□□□□ -1.96
VSX2P58304 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.81□□□□□ -1.96
VSX2P58304 SETP8-201ENST00000435341 628 ntBASIC2.81□□□□□ -1.96
VSX2P58304 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.81□□□□□ -1.96
VSX2P58304 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.81□□□□□ -1.96
VSX2P58304 NPM1P13-201ENST00000452663 865 ntBASIC2.81□□□□□ -1.96
VSX2P58304 NDUFA5P7-201ENST00000452914 242 ntBASIC2.81□□□□□ -1.96
VSX2P58304 HMGB1P15-201ENST00000453854 435 ntBASIC2.81□□□□□ -1.96
VSX2P58304 RPS29P26-201ENST00000477483 171 ntBASIC2.81□□□□□ -1.96
VSX2P58304 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VSX2P58304 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.81□□□□□ -1.96
VSX2P58304 NAMPTP2-201ENST00000505629 1115 ntBASIC2.81□□□□□ -1.96
VSX2P58304 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.81□□□□□ -1.96
VSX2P58304 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.81□□□□□ -1.96
VSX2P58304 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.81□□□□□ -1.96
VSX2P58304 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.81□□□□□ -1.96
VSX2P58304 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VSX2P58304 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.81□□□□□ -1.96
VSX2P58304 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.81□□□□□ -1.96
VSX2P58304 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.81□□□□□ -1.96
VSX2P58304 GAS5-AS1-201ENST00000602767 694 ntBASIC2.81□□□□□ -1.96
VSX2P58304 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
VSX2P58304 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.81□□□□□ -1.96
VSX2P58304 AC231759.1-201ENST00000616455 597 ntBASIC2.81□□□□□ -1.96
VSX2P58304 CR381572.1-201ENST00000625098 102 ntBASIC2.81□□□□□ -1.96
VSX2P58304 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VSX2P58304 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.81□□□□□ -1.96
VSX2P58304 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.81□□□□□ -1.96
VSX2P58304 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VSX2P58304 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VSX2P58304 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
VSX2P58304 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VSX2P58304 AC111188.2-201ENST00000529697 1387 ntBASIC2.8□□□□□ -1.96
VSX2P58304 RNU6-251P-201ENST00000363235 104 ntBASIC2.8□□□□□ -1.96
VSX2P58304 RNU6-1249P-201ENST00000363237 111 ntBASIC2.8□□□□□ -1.96
VSX2P58304 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.8□□□□□ -1.96
VSX2P58304 AL139098.1-201ENST00000407291 389 ntBASIC2.8□□□□□ -1.96
VSX2P58304 RNA5SP344-201ENST00000411081 104 ntBASIC2.8□□□□□ -1.96
VSX2P58304 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms