Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDH13P55290 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH13P55290 AL672167.1-206ENST00000356293 943 ntBASIC3.58□□□□□ -1.84
CDH13P55290 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CDH13P55290 RNU6-289P-201ENST00000364093 107 ntBASIC3.58□□□□□ -1.84
CDH13P55290 RNU6-777P-201ENST00000364265 104 ntBASIC3.58□□□□□ -1.84
CDH13P55290 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH13P55290 AC068538.1-201ENST00000376856 336 ntBASIC3.58□□□□□ -1.84
CDH13P55290 RNU6-1074P-201ENST00000383995 104 ntBASIC3.58□□□□□ -1.84
CDH13P55290 RPL7P60-201ENST00000397636 735 ntBASIC3.58□□□□□ -1.84
CDH13P55290 MIR1305-201ENST00000408300 86 ntBASIC3.58□□□□□ -1.84
CDH13P55290 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH13P55290 AC009237.5-201ENST00000414271 501 ntBASIC3.58□□□□□ -1.84
CDH13P55290 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.58□□□□□ -1.84
CDH13P55290 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH13P55290 MTND1P20-201ENST00000430341 950 ntBASIC3.58□□□□□ -1.84
CDH13P55290 SETD6P1-201ENST00000444575 317 ntBASIC3.58□□□□□ -1.84
CDH13P55290 RPS29P31-201ENST00000446147 164 ntBASIC3.58□□□□□ -1.84
CDH13P55290 OR6K5P-201ENST00000447050 945 ntBASIC3.58□□□□□ -1.84
CDH13P55290 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH13P55290 AC099563.1-201ENST00000456086 418 ntBASIC3.58□□□□□ -1.84
CDH13P55290 ARPC3P2-201ENST00000457786 533 ntBASIC3.58□□□□□ -1.84
CDH13P55290 SNORD121B-201ENST00000458838 81 ntBASIC3.58□□□□□ -1.84
CDH13P55290 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH13P55290 AP001086.1-201ENST00000494882 321 ntBASIC3.58□□□□□ -1.84
CDH13P55290 RPL23AP55-201ENST00000498163 452 ntBASIC3.58□□□□□ -1.84
CDH13P55290 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDH13P55290 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH13P55290 AC022447.3-201ENST00000506865 495 ntBASIC3.58□□□□□ -1.84
CDH13P55290 AC010460.1-201ENST00000507087 466 ntBASIC3.58□□□□□ -1.84
CDH13P55290 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH13P55290 MTCO1P35-201ENST00000515270 228 ntBASIC3.58□□□□□ -1.84
CDH13P55290 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH13P55290 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH13P55290 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH13P55290 MRPS36P5-201ENST00000551909 298 ntBASIC3.58□□□□□ -1.84
CDH13P55290 AC008015.1-201ENST00000555505 465 ntBASIC3.58□□□□□ -1.84
CDH13P55290 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.58□□□□□ -1.84
CDH13P55290 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH13P55290 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH13P55290 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDH13P55290 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH13P55290 AL451086.1-201ENST00000605596 223 ntBASIC3.58□□□□□ -1.84
CDH13P55290 TUG1_1.1-201ENST00000610654 145 ntBASIC3.58□□□□□ -1.84
CDH13P55290 AC002550.2-201ENST00000621246 394 ntBASIC3.58□□□□□ -1.84
CDH13P55290 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.58□□□□□ -1.84
CDH13P55290 AC120349.3-201ENST00000624377 529 ntBASIC3.58□□□□□ -1.84
CDH13P55290 RNA5SP196-201ENST00000625967 102 ntBASIC3.58□□□□□ -1.84
CDH13P55290 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH13P55290 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH13P55290 AC099063.3-201ENST00000642066 185 ntBASIC3.58□□□□□ -1.84
CDH13P55290 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH13P55290 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDH13P55290 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.58□□□□□ -1.84
CDH13P55290 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH13P55290 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH13P55290 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH13P55290 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH13P55290 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CDH13P55290 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CDH13P55290 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH13P55290 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDH13P55290 RNU6-744P-201ENST00000365557 107 ntBASIC3.57□□□□□ -1.84
CDH13P55290 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH13P55290 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH13P55290 RNU6-1316P-201ENST00000384242 108 ntBASIC3.57□□□□□ -1.84
CDH13P55290 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CDH13P55290 AF228730.1-201ENST00000397972 663 ntBASIC3.57□□□□□ -1.84
CDH13P55290 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH13P55290 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH13P55290 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH13P55290 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.57□□□□□ -1.84
CDH13P55290 AL139247.1-201ENST00000422768 325 ntBASIC3.57□□□□□ -1.84
CDH13P55290 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH13P55290 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH13P55290 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.57□□□□□ -1.84
CDH13P55290 AL121871.1-201ENST00000443413 436 ntBASIC3.57□□□□□ -1.84
CDH13P55290 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH13P55290 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH13P55290 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH13P55290 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH13P55290 snoU13.4-201ENST00000458916 104 ntBASIC3.57□□□□□ -1.84
CDH13P55290 RPL21P104-201ENST00000464143 478 ntBASIC3.57□□□□□ -1.84
CDH13P55290 TMED11P-201ENST00000479478 690 ntBASIC3.57□□□□□ -1.84
CDH13P55290 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.57□□□□□ -1.84
CDH13P55290 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH13P55290 AC106872.3-201ENST00000495104 446 ntBASIC3.57□□□□□ -1.84
CDH13P55290 POU5F1P7-201ENST00000508759 541 ntBASIC3.57□□□□□ -1.84
CDH13P55290 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDH13P55290 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH13P55290 MTND5P4-201ENST00000514978 288 ntBASIC3.57□□□□□ -1.84
CDH13P55290 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH13P55290 AC007954.1-201ENST00000554198 494 ntBASIC3.57□□□□□ -1.84
CDH13P55290 AC136624.4-201ENST00000573044 370 ntBASIC3.57□□□□□ -1.84
CDH13P55290 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.57□□□□□ -1.84
CDH13P55290 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.57□□□□□ -1.84
CDH13P55290 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.57□□□□□ -1.84
CDH13P55290 AC090616.2-202ENST00000584248 222 ntBASIC3.57□□□□□ -1.84
CDH13P55290 AC013444.2-201ENST00000603317 787 ntBASIC3.57□□□□□ -1.84
CDH13P55290 AC011451.2-201ENST00000604303 598 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms