Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NR1H2P55055 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NR1H2P55055 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NR1H2P55055 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
NR1H2P55055 PABPC1P9-201ENST00000426076 1612 ntBASIC3.97□□□□□ -1.77
NR1H2P55055 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NR1H2P55055 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.97□□□□□ -1.77
NR1H2P55055 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
NR1H2P55055 AC025750.1-201ENST00000399891 379 ntBASIC3.97□□□□□ -1.77
NR1H2P55055 MIR1183-201ENST00000408856 89 ntBASIC3.97□□□□□ -1.77
NR1H2P55055 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.97□□□□□ -1.77
NR1H2P55055 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.97□□□□□ -1.77
NR1H2P55055 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.97□□□□□ -1.77
NR1H2P55055 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.97□□□□□ -1.77
NR1H2P55055 THAP5P1-201ENST00000439089 262 ntBASIC3.97□□□□□ -1.77
NR1H2P55055 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.97□□□□□ -1.77
NR1H2P55055 EPS15P1-201ENST00000448836 336 ntBASIC3.97□□□□□ -1.77
NR1H2P55055 FABP3P2-201ENST00000453169 399 ntBASIC3.97□□□□□ -1.77
NR1H2P55055 RAD23BP3-201ENST00000454157 1152 ntBASIC3.97□□□□□ -1.77
NR1H2P55055 AC104308.1-201ENST00000454621 333 ntBASIC3.97□□□□□ -1.77
NR1H2P55055 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.97□□□□□ -1.77
NR1H2P55055 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.97□□□□□ -1.77
NR1H2P55055 AP1S2P1-201ENST00000457344 379 ntBASIC3.97□□□□□ -1.77
NR1H2P55055 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.97□□□□□ -1.77
NR1H2P55055 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.97□□□□□ -1.77
NR1H2P55055 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.97□□□□□ -1.77
NR1H2P55055 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.97□□□□□ -1.77
NR1H2P55055 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.97□□□□□ -1.77
NR1H2P55055 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.97□□□□□ -1.77
NR1H2P55055 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.97□□□□□ -1.77
NR1H2P55055 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NR1H2P55055 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.97□□□□□ -1.77
NR1H2P55055 AC060788.1-201ENST00000521318 469 ntBASIC3.97□□□□□ -1.77
NR1H2P55055 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.97□□□□□ -1.77
NR1H2P55055 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.97□□□□□ -1.77
NR1H2P55055 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.97□□□□□ -1.77
NR1H2P55055 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.97□□□□□ -1.77
NR1H2P55055 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.97□□□□□ -1.77
NR1H2P55055 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.97□□□□□ -1.77
NR1H2P55055 BNIP3P5-201ENST00000562290 498 ntBASIC3.97□□□□□ -1.77
NR1H2P55055 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.97□□□□□ -1.77
NR1H2P55055 OR4K8P-201ENST00000578842 1048 ntBASIC3.97□□□□□ -1.77
NR1H2P55055 AC008507.1-201ENST00000587506 734 ntBASIC3.97□□□□□ -1.77
NR1H2P55055 AL158211.4-201ENST00000606988 584 ntBASIC3.97□□□□□ -1.77
NR1H2P55055 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.97□□□□□ -1.77
NR1H2P55055 U7.8-201ENST00000619968 63 ntBASIC3.97□□□□□ -1.77
NR1H2P55055 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.97□□□□□ -1.77
NR1H2P55055 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.97□□□□□ -1.77
NR1H2P55055 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
NR1H2P55055 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NR1H2P55055 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NR1H2P55055 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NR1H2P55055 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
NR1H2P55055 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
NR1H2P55055 AC005832.2-201ENST00000538921 1430 ntBASIC3.96□□□□□ -1.77
NR1H2P55055 AC009902.3-201ENST00000606235 2172 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NR1H2P55055 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.96□□□□□ -1.78
NR1H2P55055 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.96□□□□□ -1.78
NR1H2P55055 AC021146.4-201ENST00000309229 279 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 Y_RNA.51-201ENST00000362725 102 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 RNU4-21P-201ENST00000362802 126 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 RNU6-501P-201ENST00000364072 100 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NR1H2P55055 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
NR1H2P55055 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.96□□□□□ -1.78
NR1H2P55055 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
NR1H2P55055 DEFB109C-201ENST00000382575 264 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 DEFB109B-201ENST00000382656 264 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 PGBD4P8-201ENST00000412993 562 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 BTF3L4P1-201ENST00000413813 468 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.96□□□□□ -1.78
NR1H2P55055 MORF4L1P6-201ENST00000418771 268 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 RPL27AP8-201ENST00000424277 446 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.96□□□□□ -1.78
NR1H2P55055 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.96□□□□□ -1.78
NR1H2P55055 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.96□□□□□ -1.78
NR1H2P55055 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.96□□□□□ -1.78
NR1H2P55055 RSU1P2-202ENST00000437884 485 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.96□□□□□ -1.78
NR1H2P55055 TAF9P1-201ENST00000445421 515 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 AL360221.1-201ENST00000445989 335 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.96□□□□□ -1.78
NR1H2P55055 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.96□□□□□ -1.78
NR1H2P55055 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.96□□□□□ -1.78
NR1H2P55055 TAF9P2-201ENST00000454958 515 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.96□□□□□ -1.78
NR1H2P55055 OR6K1P-201ENST00000456766 971 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 RN7SL303P-201ENST00000469773 251 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 HMGB1P36-201ENST00000487709 576 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
NR1H2P55055 AC026801.2-201ENST00000515352 425 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 RN7SKP289-201ENST00000517244 295 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 IGKV2-38-201ENST00000517443 247 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 IGKV2D-23-201ENST00000518179 286 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.96□□□□□ -1.78
NR1H2P55055 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.96□□□□□ -1.78
NR1H2P55055 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.96□□□□□ -1.78
NR1H2P55055 AC007115.1-201ENST00000546853 234 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 AC023161.2-201ENST00000551218 780 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms