Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
BRCA2P51587 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
BRCA2P51587 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC2.12□□□□□ -2.07
BRCA2P51587 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
BRCA2P51587 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
BRCA2P51587 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC2.12□□□□□ -2.07
BRCA2P51587 RPS4XP11-201ENST00000446897 772 ntBASIC2.12□□□□□ -2.07
BRCA2P51587 NAMPTP2-201ENST00000505629 1115 ntBASIC2.12□□□□□ -2.07
BRCA2P51587 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.12□□□□□ -2.07
BRCA2P51587 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
BRCA2P51587 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
BRCA2P51587 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC2.12□□□□□ -2.07
BRCA2P51587 AL606537.1-201ENST00000607258 2011 ntBASIC2.12□□□□□ -2.07
BRCA2P51587 AL391987.6-201ENST00000305671 199 ntBASIC2.12□□□□□ -2.07
BRCA2P51587 AC008526.1-201ENST00000509149 338 ntBASIC2.12□□□□□ -2.07
BRCA2P51587 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.12□□□□□ -2.07
BRCA2P51587 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
BRCA2P51587 RNU1-51P-201ENST00000365345 176 ntBASIC2.11□□□□□ -2.07
BRCA2P51587 AC092473.1-201ENST00000441098 221 ntBASIC2.11□□□□□ -2.07
BRCA2P51587 AC093010.3-201ENST00000570269 15214 ntBASIC2.11□□□□□ -2.07
BRCA2P51587 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
BRCA2P51587 AC244517.1-201ENST00000606030 2086 ntBASIC2.11□□□□□ -2.07
BRCA2P51587 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.11□□□□□ -2.07
BRCA2P51587 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.11□□□□□ -2.07
BRCA2P51587 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC2.11□□□□□ -2.07
BRCA2P51587 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
BRCA2P51587 CBWD4P-201ENST00000445695 655 ntBASIC2.11□□□□□ -2.07
BRCA2P51587 SNRPFP4-201ENST00000456366 242 ntBASIC2.11□□□□□ -2.07
BRCA2P51587 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.11□□□□□ -2.07
BRCA2P51587 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.11□□□□□ -2.07
BRCA2P51587 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
BRCA2P51587 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.11□□□□□ -2.07
BRCA2P51587 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.11□□□□□ -2.07
BRCA2P51587 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.11□□□□□ -2.07
BRCA2P51587 AC010680.1-201ENST00000590024 3590 ntBASIC2.11□□□□□ -2.07
BRCA2P51587 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.1□□□□□ -2.07
BRCA2P51587 MIR1294-201ENST00000408503 142 ntBASIC2.1□□□□□ -2.07
BRCA2P51587 AL513321.1-201ENST00000441175 761 ntBASIC2.1□□□□□ -2.07
BRCA2P51587 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.1□□□□□ -2.07
BRCA2P51587 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.1□□□□□ -2.07
BRCA2P51587 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.1□□□□□ -2.07
BRCA2P51587 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
BRCA2P51587 PNPT1P2-201ENST00000456768 2050 ntBASIC2.1□□□□□ -2.07
BRCA2P51587 SET-203ENST00000372688 801 ntTSL 2 BASIC2.1□□□□□ -2.07
BRCA2P51587 NCSTNP1-201ENST00000406229 144 ntBASIC2.1□□□□□ -2.07
BRCA2P51587 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC2.1□□□□□ -2.07
BRCA2P51587 AL390023.1-201ENST00000428836 262 ntBASIC2.1□□□□□ -2.07
BRCA2P51587 SDR42E1P3-201ENST00000438345 502 ntBASIC2.1□□□□□ -2.07
BRCA2P51587 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.1□□□□□ -2.07
BRCA2P51587 CDC42P1-201ENST00000456658 548 ntBASIC2.1□□□□□ -2.07
BRCA2P51587 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.1□□□□□ -2.07
BRCA2P51587 AL450489.1-201ENST00000612071 468 ntBASIC2.1□□□□□ -2.07
BRCA2P51587 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
BRCA2P51587 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
BRCA2P51587 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.1□□□□□ -2.07
BRCA2P51587 AC008015.1-201ENST00000555505 465 ntBASIC2.1□□□□□ -2.07
BRCA2P51587 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.1□□□□□ -2.07
BRCA2P51587 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
BRCA2P51587 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
BRCA2P51587 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
BRCA2P51587 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
BRCA2P51587 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.09□□□□□ -2.07
BRCA2P51587 RNU6-53P-201ENST00000365367 106 ntBASIC2.09□□□□□ -2.08
BRCA2P51587 RPL23AP14-201ENST00000468281 468 ntBASIC2.09□□□□□ -2.08
BRCA2P51587 AC087441.2-201ENST00000529141 262 ntBASIC2.09□□□□□ -2.08
BRCA2P51587 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
BRCA2P51587 MIR5089-201ENST00000580047 84 ntBASIC2.09□□□□□ -2.08
BRCA2P51587 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.09□□□□□ -2.08
BRCA2P51587 AC002076.2-201ENST00000617362 122 ntBASIC2.09□□□□□ -2.08
BRCA2P51587 AC084768.2-201ENST00000622736 221 ntBASIC2.09□□□□□ -2.08
BRCA2P51587 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
BRCA2P51587 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
BRCA2P51587 AP000852.1-201ENST00000472460 573 ntBASIC2.08□□□□□ -2.08
BRCA2P51587 AC011604.1-201ENST00000545978 196 ntBASIC2.08□□□□□ -2.08
BRCA2P51587 AC005730.3-201ENST00000583067 366 ntBASIC2.08□□□□□ -2.08
BRCA2P51587 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.08□□□□□ -2.08
BRCA2P51587 AC069234.5-201ENST00000611056 416 ntBASIC2.08□□□□□ -2.08
BRCA2P51587 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.08□□□□□ -2.08
BRCA2P51587 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
BRCA2P51587 RPS15AP6-201ENST00000420703 385 ntBASIC2.08□□□□□ -2.08
BRCA2P51587 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.08□□□□□ -2.08
BRCA2P51587 SSXP1-201ENST00000453640 473 ntBASIC2.08□□□□□ -2.08
BRCA2P51587 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.08□□□□□ -2.08
BRCA2P51587 AP002748.2-201ENST00000528671 348 ntBASIC2.08□□□□□ -2.08
BRCA2P51587 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.08□□□□□ -2.08
BRCA2P51587 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.08□□□□□ -2.08
BRCA2P51587 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.08□□□□□ -2.08
BRCA2P51587 AC019159.1-201ENST00000605094 187 ntBASIC2.08□□□□□ -2.08
BRCA2P51587 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.08□□□□□ -2.08
BRCA2P51587 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.08□□□□□ -2.08
BRCA2P51587 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
BRCA2P51587 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
BRCA2P51587 AL355578.1-201ENST00000607405 1328 ntBASIC2.08□□□□□ -2.08
BRCA2P51587 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.08□□□□□ -2.08
BRCA2P51587 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
BRCA2P51587 HMGN1P7-201ENST00000491722 313 ntBASIC2.08□□□□□ -2.08
BRCA2P51587 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.08□□□□□ -2.08
BRCA2P51587 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.08□□□□□ -2.08
BRCA2P51587 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.08□□□□□ -2.08
BRCA2P51587 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms