Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 ZNF962P-201ENST00000443465 3140 ntBASIC3.84□□□□□ -1.8
SOX2P48431 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SOX2P48431 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SOX2P48431 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.83□□□□□ -1.8
SOX2P48431 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SOX2P48431 OR5J1P-201ENST00000313544 939 ntBASIC3.83□□□□□ -1.8
SOX2P48431 RN7SKP44-201ENST00000363602 316 ntBASIC3.83□□□□□ -1.8
SOX2P48431 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.83□□□□□ -1.8
SOX2P48431 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SOX2P48431 Y_RNA.573-201ENST00000384763 105 ntBASIC3.83□□□□□ -1.8
SOX2P48431 MIR93-201ENST00000385024 80 ntBASIC3.83□□□□□ -1.8
SOX2P48431 RNU6-780P-201ENST00000391030 104 ntBASIC3.83□□□□□ -1.8
SOX2P48431 HMGN1P24-201ENST00000412282 298 ntBASIC3.83□□□□□ -1.8
SOX2P48431 AC004552.1-201ENST00000419089 348 ntBASIC3.83□□□□□ -1.8
SOX2P48431 ELOCP4-201ENST00000420090 333 ntBASIC3.83□□□□□ -1.8
SOX2P48431 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.83□□□□□ -1.8
SOX2P48431 MTCO2P19-201ENST00000427513 598 ntBASIC3.83□□□□□ -1.8
SOX2P48431 AC137499.1-201ENST00000427602 88 ntBASIC3.83□□□□□ -1.8
SOX2P48431 ELOCP14-201ENST00000428070 331 ntBASIC3.83□□□□□ -1.8
SOX2P48431 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.83□□□□□ -1.8
SOX2P48431 ELOCP7-201ENST00000439968 331 ntBASIC3.83□□□□□ -1.8
SOX2P48431 RAC1P7-201ENST00000445367 377 ntBASIC3.83□□□□□ -1.8
SOX2P48431 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.83□□□□□ -1.8
SOX2P48431 ABCF2P2-201ENST00000450549 296 ntBASIC3.83□□□□□ -1.8
SOX2P48431 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.83□□□□□ -1.8
SOX2P48431 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.83□□□□□ -1.8
SOX2P48431 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.83□□□□□ -1.8
SOX2P48431 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.83□□□□□ -1.8
SOX2P48431 RPS26P3-201ENST00000470205 348 ntBASIC3.83□□□□□ -1.8
SOX2P48431 RPL21P103-201ENST00000479921 488 ntBASIC3.83□□□□□ -1.8
SOX2P48431 AC090543.2-201ENST00000483963 348 ntBASIC3.83□□□□□ -1.8
SOX2P48431 AC004057.1-201ENST00000485827 348 ntBASIC3.83□□□□□ -1.8
SOX2P48431 FCF1P3-201ENST00000496394 590 ntBASIC3.83□□□□□ -1.8
SOX2P48431 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.83□□□□□ -1.8
SOX2P48431 MYL12AP1-201ENST00000518490 515 ntBASIC3.83□□□□□ -1.8
SOX2P48431 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.83□□□□□ -1.8
SOX2P48431 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.83□□□□□ -1.8
SOX2P48431 AP003034.1-201ENST00000534621 422 ntBASIC3.83□□□□□ -1.8
SOX2P48431 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.83□□□□□ -1.8
SOX2P48431 AL512310.1-201ENST00000548639 172 ntBASIC3.83□□□□□ -1.8
SOX2P48431 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.83□□□□□ -1.8
SOX2P48431 AL157687.1-201ENST00000554853 619 ntBASIC3.83□□□□□ -1.8
SOX2P48431 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.83□□□□□ -1.8
SOX2P48431 MIR3167-201ENST00000579623 85 ntBASIC3.83□□□□□ -1.8
SOX2P48431 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SOX2P48431 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.83□□□□□ -1.8
SOX2P48431 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.83□□□□□ -1.8
SOX2P48431 AC068790.5-201ENST00000602741 355 ntBASIC3.83□□□□□ -1.8
SOX2P48431 AL391646.1-201ENST00000603860 190 ntBASIC3.83□□□□□ -1.8
SOX2P48431 AC008277.2-201ENST00000605196 797 ntBASIC3.83□□□□□ -1.8
SOX2P48431 AL445222.1-201ENST00000607259 628 ntBASIC3.83□□□□□ -1.8
SOX2P48431 AC017083.3-201ENST00000609955 700 ntBASIC3.83□□□□□ -1.8
SOX2P48431 AC019278.1-201ENST00000623516 479 ntBASIC3.83□□□□□ -1.8
SOX2P48431 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.83□□□□□ -1.8
SOX2P48431 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.83□□□□□ -1.8
SOX2P48431 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SOX2P48431 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.83□□□□□ -1.8
SOX2P48431 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SOX2P48431 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SOX2P48431 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
SOX2P48431 FAM91A3P-201ENST00000456826 2544 ntBASIC3.82□□□□□ -1.8
SOX2P48431 PNPT1P2-201ENST00000456768 2050 ntBASIC3.82□□□□□ -1.8
SOX2P48431 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.82□□□□□ -1.8
SOX2P48431 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SOX2P48431 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.82□□□□□ -1.8
SOX2P48431 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SOX2P48431 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SOX2P48431 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SOX2P48431 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SOX2P48431 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SOX2P48431 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SOX2P48431 Y_RNA.88-201ENST00000363029 99 ntBASIC3.82□□□□□ -1.8
SOX2P48431 SNORD74.4-201ENST00000364129 80 ntBASIC3.82□□□□□ -1.8
SOX2P48431 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SOX2P48431 RNU6-356P-201ENST00000384140 107 ntBASIC3.82□□□□□ -1.8
SOX2P48431 SDHCP2-201ENST00000398565 501 ntBASIC3.82□□□□□ -1.8
SOX2P48431 AL121834.1-202ENST00000404494 277 ntBASIC3.82□□□□□ -1.8
SOX2P48431 RN7SKP285-201ENST00000410137 318 ntBASIC3.82□□□□□ -1.8
SOX2P48431 RPL23AP27-201ENST00000415161 451 ntBASIC3.82□□□□□ -1.8
SOX2P48431 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.82□□□□□ -1.8
SOX2P48431 AL391219.1-201ENST00000422570 483 ntBASIC3.82□□□□□ -1.8
SOX2P48431 AC009480.2-201ENST00000422916 432 ntBASIC3.82□□□□□ -1.8
SOX2P48431 CHIAP3-201ENST00000423668 1133 ntBASIC3.82□□□□□ -1.8
SOX2P48431 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.82□□□□□ -1.8
SOX2P48431 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.8
SOX2P48431 CKS1BP5-201ENST00000434172 273 ntBASIC3.82□□□□□ -1.8
SOX2P48431 TIMM9P1-201ENST00000436122 256 ntBASIC3.82□□□□□ -1.8
SOX2P48431 FTH1P1-201ENST00000437933 532 ntBASIC3.82□□□□□ -1.8
SOX2P48431 AC093156.1-201ENST00000440382 670 ntBASIC3.82□□□□□ -1.8
SOX2P48431 RPL23AP20-201ENST00000447965 421 ntBASIC3.82□□□□□ -1.8
SOX2P48431 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.82□□□□□ -1.8
SOX2P48431 HMGB1P25-201ENST00000468402 607 ntBASIC3.82□□□□□ -1.8
SOX2P48431 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.82□□□□□ -1.8
SOX2P48431 AK3P4-201ENST00000504283 583 ntBASIC3.82□□□□□ -1.8
SOX2P48431 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.82□□□□□ -1.8
SOX2P48431 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.82□□□□□ -1.8
SOX2P48431 AC017037.2-201ENST00000513850 890 ntBASIC3.82□□□□□ -1.8
SOX2P48431 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.82□□□□□ -1.8
SOX2P48431 AC109635.3-201ENST00000529536 185 ntBASIC3.82□□□□□ -1.8
SOX2P48431 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms