Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 POU5F1P7-201ENST00000508759 541 ntBASIC2.92□□□□□ -1.94
RFX3P48380 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.92□□□□□ -1.94
RFX3P48380 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.92□□□□□ -1.94
RFX3P48380 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.92□□□□□ -1.94
RFX3P48380 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.92□□□□□ -1.94
RFX3P48380 AC087894.1-201ENST00000538359 518 ntBASIC2.92□□□□□ -1.94
RFX3P48380 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.92□□□□□ -1.94
RFX3P48380 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.92□□□□□ -1.94
RFX3P48380 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.92□□□□□ -1.94
RFX3P48380 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.92□□□□□ -1.94
RFX3P48380 AC093519.1-201ENST00000566109 298 ntBASIC2.92□□□□□ -1.94
RFX3P48380 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.92□□□□□ -1.94
RFX3P48380 AP001542.2-201ENST00000593141 364 ntBASIC2.92□□□□□ -1.94
RFX3P48380 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.92□□□□□ -1.94
RFX3P48380 VN1R87P-201ENST00000596706 487 ntBASIC2.92□□□□□ -1.94
RFX3P48380 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.92□□□□□ -1.94
RFX3P48380 AC012468.1-201ENST00000604888 430 ntBASIC2.92□□□□□ -1.94
RFX3P48380 AC106900.2-201ENST00000604994 317 ntBASIC2.92□□□□□ -1.94
RFX3P48380 AC055876.5-201ENST00000605667 259 ntBASIC2.92□□□□□ -1.94
RFX3P48380 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.92□□□□□ -1.94
RFX3P48380 AL512506.2-201ENST00000624472 458 ntBASIC2.92□□□□□ -1.94
RFX3P48380 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.92□□□□□ -1.94
RFX3P48380 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.92□□□□□ -1.94
RFX3P48380 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.92□□□□□ -1.94
RFX3P48380 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RFX3P48380 MTND5P24-201ENST00000438892 1767 ntBASIC2.92□□□□□ -1.94
RFX3P48380 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RFX3P48380 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RFX3P48380 RNU6-839P-201ENST00000363347 108 ntBASIC2.91□□□□□ -1.94
RFX3P48380 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
RFX3P48380 SNORA46-201ENST00000384762 135 ntBASIC2.91□□□□□ -1.94
RFX3P48380 AC110754.1-201ENST00000399740 601 ntBASIC2.91□□□□□ -1.94
RFX3P48380 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX3P48380 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX3P48380 MTCO1P39-201ENST00000426148 480 ntBASIC2.91□□□□□ -1.94
RFX3P48380 MTATP6P4-201ENST00000427725 675 ntBASIC2.91□□□□□ -1.94
RFX3P48380 MTND4LP10-201ENST00000435146 291 ntBASIC2.91□□□□□ -1.94
RFX3P48380 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX3P48380 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX3P48380 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX3P48380 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RFX3P48380 BX510359.1-201ENST00000456973 237 ntBASIC2.91□□□□□ -1.94
RFX3P48380 AC068724.1-201ENST00000487100 792 ntBASIC2.91□□□□□ -1.94
RFX3P48380 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX3P48380 AC118282.1-201ENST00000506408 765 ntBASIC2.91□□□□□ -1.94
RFX3P48380 AC026412.2-201ENST00000512270 1075 ntBASIC2.91□□□□□ -1.94
RFX3P48380 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX3P48380 SNORD59.2-201ENST00000516873 68 ntBASIC2.91□□□□□ -1.94
RFX3P48380 ERHP1-201ENST00000523006 310 ntBASIC2.91□□□□□ -1.94
RFX3P48380 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RFX3P48380 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.91□□□□□ -1.94
RFX3P48380 CYB5AP5-201ENST00000549779 389 ntBASIC2.91□□□□□ -1.94
RFX3P48380 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX3P48380 SULT1C2P1-202ENST00000562418 459 ntBASIC2.91□□□□□ -1.94
RFX3P48380 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.91□□□□□ -1.94
RFX3P48380 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.91□□□□□ -1.94
RFX3P48380 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.91□□□□□ -1.94
RFX3P48380 BNIP3P19-201ENST00000605397 577 ntBASIC2.91□□□□□ -1.94
RFX3P48380 AC004832.5-201ENST00000608677 401 ntBASIC2.91□□□□□ -1.94
RFX3P48380 AC100793.4-201ENST00000613683 429 ntBASIC2.91□□□□□ -1.94
RFX3P48380 MIR7112-201ENST00000616126 65 ntBASIC2.91□□□□□ -1.94
RFX3P48380 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.91□□□□□ -1.94
RFX3P48380 VN1R7P-201ENST00000619242 903 ntBASIC2.91□□□□□ -1.94
RFX3P48380 AC099506.2-201ENST00000623074 221 ntBASIC2.91□□□□□ -1.94
RFX3P48380 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.91□□□□□ -1.94
RFX3P48380 AC139713.2-210ENST00000641741 992 ntBASIC2.91□□□□□ -1.94
RFX3P48380 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.91□□□□□ -1.94
RFX3P48380 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
RFX3P48380 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.91□□□□□ -1.94
RFX3P48380 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.91□□□□□ -1.94
RFX3P48380 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
RFX3P48380 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
RFX3P48380 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
RFX3P48380 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.9□□□□□ -1.94
RFX3P48380 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
RFX3P48380 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
RFX3P48380 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RFX3P48380 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RFX3P48380 RNU5B-4P-201ENST00000363508 111 ntBASIC2.9□□□□□ -1.95
RFX3P48380 SNORA38.1-201ENST00000364172 131 ntBASIC2.9□□□□□ -1.95
RFX3P48380 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
RFX3P48380 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
RFX3P48380 SNORD67-201ENST00000390833 111 ntBASIC2.9□□□□□ -1.95
RFX3P48380 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
RFX3P48380 CYCSP45-201ENST00000402289 315 ntBASIC2.9□□□□□ -1.95
RFX3P48380 AL133264.1-201ENST00000407157 562 ntBASIC2.9□□□□□ -1.95
RFX3P48380 RN7SKP58-201ENST00000411010 305 ntBASIC2.9□□□□□ -1.95
RFX3P48380 AC092638.1-201ENST00000411966 1275 ntBASIC2.9□□□□□ -1.95
RFX3P48380 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.9□□□□□ -1.95
RFX3P48380 BOLA3P4-201ENST00000418151 400 ntBASIC2.9□□□□□ -1.95
RFX3P48380 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.9□□□□□ -1.95
RFX3P48380 RAC1P8-201ENST00000427086 527 ntBASIC2.9□□□□□ -1.95
RFX3P48380 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.9□□□□□ -1.95
RFX3P48380 SNRPEP4-201ENST00000435815 279 ntBASIC2.9□□□□□ -1.95
RFX3P48380 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.9□□□□□ -1.95
RFX3P48380 AC241584.1-201ENST00000438469 1241 ntBASIC2.9□□□□□ -1.95
RFX3P48380 ARF4P4-201ENST00000439608 520 ntBASIC2.9□□□□□ -1.95
RFX3P48380 HMGB3P6-201ENST00000444896 598 ntBASIC2.9□□□□□ -1.95
RFX3P48380 COX6CP18-201ENST00000448769 222 ntBASIC2.9□□□□□ -1.95
RFX3P48380 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms