Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC068831.7-201ENST00000616954 363 ntBASIC2.82□□□□□ -1.96
RFC3P40938 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.82□□□□□ -1.96
RFC3P40938 AC040168.1-201ENST00000623594 991 ntBASIC2.82□□□□□ -1.96
RFC3P40938 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.82□□□□□ -1.96
RFC3P40938 SCARNA15.3-201ENST00000626315 122 ntBASIC2.82□□□□□ -1.96
RFC3P40938 AC073476.4-201ENST00000628409 72 ntBASIC2.82□□□□□ -1.96
RFC3P40938 SCARNA4.1-201ENST00000628597 123 ntBASIC2.82□□□□□ -1.96
RFC3P40938 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.82□□□□□ -1.96
RFC3P40938 ZNF663P-202ENST00000641770 1131 ntBASIC2.82□□□□□ -1.96
RFC3P40938 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RFC3P40938 SGO1P2-201ENST00000429458 1589 ntBASIC2.82□□□□□ -1.96
RFC3P40938 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RFC3P40938 AL049780.3-201ENST00000624612 1583 ntBASIC2.82□□□□□ -1.96
RFC3P40938 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RFC3P40938 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
RFC3P40938 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.81□□□□□ -1.96
RFC3P40938 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RFC3P40938 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
RFC3P40938 RNU6-251P-201ENST00000363235 104 ntBASIC2.81□□□□□ -1.96
RFC3P40938 U3.6-201ENST00000363622 211 ntBASIC2.81□□□□□ -1.96
RFC3P40938 RNU6-353P-201ENST00000364266 108 ntBASIC2.81□□□□□ -1.96
RFC3P40938 SNORA71.1-201ENST00000364523 117 ntBASIC2.81□□□□□ -1.96
RFC3P40938 RNU1-140P-201ENST00000365040 165 ntBASIC2.81□□□□□ -1.96
RFC3P40938 SNORD82-201ENST00000365530 70 ntBASIC2.81□□□□□ -1.96
RFC3P40938 SNORD116-23-201ENST00000384645 92 ntBASIC2.81□□□□□ -1.96
RFC3P40938 RNU1-101P-201ENST00000391171 127 ntBASIC2.81□□□□□ -1.96
RFC3P40938 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.81□□□□□ -1.96
RFC3P40938 AC110754.1-201ENST00000399740 601 ntBASIC2.81□□□□□ -1.96
RFC3P40938 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.81□□□□□ -1.96
RFC3P40938 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.81□□□□□ -1.96
RFC3P40938 RPL21P32-201ENST00000419877 477 ntBASIC2.81□□□□□ -1.96
RFC3P40938 UBE2D3P2-201ENST00000424409 445 ntBASIC2.81□□□□□ -1.96
RFC3P40938 DEFB130D-201ENST00000426866 237 ntBASIC2.81□□□□□ -1.96
RFC3P40938 AC005345.1-201ENST00000431868 217 ntBASIC2.81□□□□□ -1.96
RFC3P40938 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.81□□□□□ -1.96
RFC3P40938 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.81□□□□□ -1.96
RFC3P40938 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.81□□□□□ -1.96
RFC3P40938 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.81□□□□□ -1.96
RFC3P40938 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.81□□□□□ -1.96
RFC3P40938 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.81□□□□□ -1.96
RFC3P40938 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.81□□□□□ -1.96
RFC3P40938 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.81□□□□□ -1.96
RFC3P40938 SNORA31.8-201ENST00000516327 108 ntBASIC2.81□□□□□ -1.96
RFC3P40938 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.81□□□□□ -1.96
RFC3P40938 AC239860.2-201ENST00000525886 270 ntBASIC2.81□□□□□ -1.96
RFC3P40938 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.81□□□□□ -1.96
RFC3P40938 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.81□□□□□ -1.96
RFC3P40938 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.81□□□□□ -1.96
RFC3P40938 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.81□□□□□ -1.96
RFC3P40938 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.81□□□□□ -1.96
RFC3P40938 MIR4789-201ENST00000577469 82 ntBASIC2.81□□□□□ -1.96
RFC3P40938 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.81□□□□□ -1.96
RFC3P40938 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.81□□□□□ -1.96
RFC3P40938 AC002487.1-201ENST00000604565 994 ntBASIC2.81□□□□□ -1.96
RFC3P40938 AC069234.5-201ENST00000611056 416 ntBASIC2.81□□□□□ -1.96
RFC3P40938 AL162574.2-201ENST00000614618 657 ntBASIC2.81□□□□□ -1.96
RFC3P40938 AC095031.1-201ENST00000623685 672 ntBASIC2.81□□□□□ -1.96
RFC3P40938 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.81□□□□□ -1.96
RFC3P40938 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.81□□□□□ -1.96
RFC3P40938 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.81□□□□□ -1.96
RFC3P40938 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
RFC3P40938 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RFC3P40938 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RFC3P40938 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RFC3P40938 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
RFC3P40938 NUP58P1-201ENST00000502546 1738 ntBASIC2.8□□□□□ -1.96
RFC3P40938 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RFC3P40938 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.8□□□□□ -1.96
RFC3P40938 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RFC3P40938 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RFC3P40938 MIR22-201ENST00000362190 85 ntBASIC2.8□□□□□ -1.96
RFC3P40938 U3.29-201ENST00000391296 212 ntBASIC2.8□□□□□ -1.96
RFC3P40938 FCF1P2-201ENST00000415284 583 ntBASIC2.8□□□□□ -1.96
RFC3P40938 SFR1P2-201ENST00000421841 730 ntBASIC2.8□□□□□ -1.96
RFC3P40938 OR2AS1P-201ENST00000427827 319 ntBASIC2.8□□□□□ -1.96
RFC3P40938 RPL21P40-201ENST00000428586 483 ntBASIC2.8□□□□□ -1.96
RFC3P40938 RPL17P35-201ENST00000432217 549 ntBASIC2.8□□□□□ -1.96
RFC3P40938 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.8□□□□□ -1.96
RFC3P40938 ELOCP23-201ENST00000452014 332 ntBASIC2.8□□□□□ -1.96
RFC3P40938 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.8□□□□□ -1.96
RFC3P40938 RPL32P14-201ENST00000463196 378 ntBASIC2.8□□□□□ -1.96
RFC3P40938 GAPDHP39-201ENST00000481866 979 ntBASIC2.8□□□□□ -1.96
RFC3P40938 AC093767.1-201ENST00000504523 156 ntBASIC2.8□□□□□ -1.96
RFC3P40938 ARL4AP2-201ENST00000507378 601 ntBASIC2.8□□□□□ -1.96
RFC3P40938 AC010374.2-201ENST00000512933 535 ntBASIC2.8□□□□□ -1.96
RFC3P40938 AC119751.5-201ENST00000514077 770 ntBASIC2.8□□□□□ -1.96
RFC3P40938 AC104986.1-201ENST00000517978 436 ntBASIC2.8□□□□□ -1.96
RFC3P40938 PSMA2P1-201ENST00000526365 646 ntBASIC2.8□□□□□ -1.96
RFC3P40938 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RFC3P40938 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.8□□□□□ -1.96
RFC3P40938 AL391156.1-201ENST00000554965 554 ntBASIC2.8□□□□□ -1.96
RFC3P40938 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.8□□□□□ -1.96
RFC3P40938 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.8□□□□□ -1.96
RFC3P40938 SNORD84-203ENST00000584275 78 ntBASIC2.8□□□□□ -1.96
RFC3P40938 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.8□□□□□ -1.96
RFC3P40938 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.8□□□□□ -1.96
RFC3P40938 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.8□□□□□ -1.96
RFC3P40938 AC131902.3-201ENST00000611767 581 ntBASIC2.8□□□□□ -1.96
RFC3P40938 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.8□□□□□ -1.96
RFC3P40938 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms