Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RNA5SP235-201ENST00000365411 114 ntBASIC3.26□□□□□ -1.89
SHC1P29353 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHC1P29353 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.26□□□□□ -1.89
SHC1P29353 AL121978.1-201ENST00000402778 359 ntBASIC3.26□□□□□ -1.89
SHC1P29353 Y_RNA.619-201ENST00000410951 90 ntBASIC3.26□□□□□ -1.89
SHC1P29353 AC009237.2-201ENST00000421358 284 ntBASIC3.26□□□□□ -1.89
SHC1P29353 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.26□□□□□ -1.89
SHC1P29353 AC006989.1-201ENST00000427212 131 ntBASIC3.26□□□□□ -1.89
SHC1P29353 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.26□□□□□ -1.89
SHC1P29353 B3GNT2P1-201ENST00000434960 952 ntBASIC3.26□□□□□ -1.89
SHC1P29353 Z95327.1-201ENST00000446082 482 ntBASIC3.26□□□□□ -1.89
SHC1P29353 RPS3AP46-201ENST00000448352 682 ntBASIC3.26□□□□□ -1.89
SHC1P29353 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.26□□□□□ -1.89
SHC1P29353 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.26□□□□□ -1.89
SHC1P29353 ZNF114P1-201ENST00000453500 292 ntBASIC3.26□□□□□ -1.89
SHC1P29353 ANP32BP2-201ENST00000454525 545 ntBASIC3.26□□□□□ -1.89
SHC1P29353 AC099563.1-201ENST00000456086 418 ntBASIC3.26□□□□□ -1.89
SHC1P29353 NF1P3-201ENST00000457709 450 ntBASIC3.26□□□□□ -1.89
SHC1P29353 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.26□□□□□ -1.89
SHC1P29353 SNORA67.7-201ENST00000516664 135 ntBASIC3.26□□□□□ -1.89
SHC1P29353 RNU6-1261P-201ENST00000517194 104 ntBASIC3.26□□□□□ -1.89
SHC1P29353 AP001207.1-201ENST00000524051 481 ntBASIC3.26□□□□□ -1.89
SHC1P29353 AP001189.2-201ENST00000527320 189 ntBASIC3.26□□□□□ -1.89
SHC1P29353 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.26□□□□□ -1.89
SHC1P29353 AL139174.1-201ENST00000531489 886 ntBASIC3.26□□□□□ -1.89
SHC1P29353 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.26□□□□□ -1.89
SHC1P29353 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.26□□□□□ -1.89
SHC1P29353 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.26□□□□□ -1.89
SHC1P29353 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.26□□□□□ -1.89
SHC1P29353 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.26□□□□□ -1.89
SHC1P29353 DEFB131E-202ENST00000602581 683 ntBASIC3.26□□□□□ -1.89
SHC1P29353 U73023.1-201ENST00000603134 700 ntBASIC3.26□□□□□ -1.89
SHC1P29353 MTCYBP22-201ENST00000603788 447 ntBASIC3.26□□□□□ -1.89
SHC1P29353 AC091488.1-201ENST00000604239 660 ntBASIC3.26□□□□□ -1.89
SHC1P29353 AL031775.1-201ENST00000607014 887 ntBASIC3.26□□□□□ -1.89
SHC1P29353 AC239868.4-201ENST00000608318 671 ntBASIC3.26□□□□□ -1.89
SHC1P29353 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHC1P29353 AC009509.4-201ENST00000619202 509 ntBASIC3.26□□□□□ -1.89
SHC1P29353 AC006065.5-201ENST00000623427 349 ntBASIC3.26□□□□□ -1.89
SHC1P29353 AC112200.1-201ENST00000625015 234 ntBASIC3.26□□□□□ -1.89
SHC1P29353 AL034408.1-202ENST00000636088 415 ntBASIC3.26□□□□□ -1.89
SHC1P29353 AC099063.3-201ENST00000642066 185 ntBASIC3.26□□□□□ -1.89
SHC1P29353 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHC1P29353 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SHC1P29353 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHC1P29353 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHC1P29353 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SHC1P29353 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHC1P29353 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHC1P29353 AC016716.1-201ENST00000265882 708 ntBASIC3.25□□□□□ -1.89
SHC1P29353 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SHC1P29353 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHC1P29353 SNORA62.3-201ENST00000365110 153 ntBASIC3.25□□□□□ -1.89
SHC1P29353 AL359837.1-201ENST00000381357 287 ntBASIC3.25□□□□□ -1.89
SHC1P29353 RNU6-1293P-201ENST00000384077 107 ntBASIC3.25□□□□□ -1.89
SHC1P29353 RNU6-356P-201ENST00000384140 107 ntBASIC3.25□□□□□ -1.89
SHC1P29353 SNORA48.7-201ENST00000391302 135 ntBASIC3.25□□□□□ -1.89
SHC1P29353 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHC1P29353 AL450338.1-201ENST00000407987 512 ntBASIC3.25□□□□□ -1.89
SHC1P29353 MIR1284-201ENST00000408337 120 ntBASIC3.25□□□□□ -1.89
SHC1P29353 RNU2-21P-201ENST00000410368 188 ntBASIC3.25□□□□□ -1.89
SHC1P29353 Z99497.1-201ENST00000421282 135 ntBASIC3.25□□□□□ -1.89
SHC1P29353 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHC1P29353 MTCO2P34-201ENST00000421994 607 ntBASIC3.25□□□□□ -1.89
SHC1P29353 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.25□□□□□ -1.89
SHC1P29353 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.25□□□□□ -1.89
SHC1P29353 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.25□□□□□ -1.89
SHC1P29353 AC091286.1-201ENST00000431233 461 ntBASIC3.25□□□□□ -1.89
SHC1P29353 RPL37P1-201ENST00000432310 284 ntBASIC3.25□□□□□ -1.89
SHC1P29353 USP9YP7-201ENST00000436723 430 ntBASIC3.25□□□□□ -1.89
SHC1P29353 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.25□□□□□ -1.89
SHC1P29353 MTND1P30-201ENST00000441241 901 ntBASIC3.25□□□□□ -1.89
SHC1P29353 TXNP1-201ENST00000441872 371 ntBASIC3.25□□□□□ -1.89
SHC1P29353 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.25□□□□□ -1.89
SHC1P29353 AC010655.1-201ENST00000449336 292 ntBASIC3.25□□□□□ -1.89
SHC1P29353 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.25□□□□□ -1.89
SHC1P29353 USP9YP32-201ENST00000452432 430 ntBASIC3.25□□□□□ -1.89
SHC1P29353 RPL23AP14-201ENST00000468281 468 ntBASIC3.25□□□□□ -1.89
SHC1P29353 AC146507.1-201ENST00000468335 354 ntBASIC3.25□□□□□ -1.89
SHC1P29353 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.25□□□□□ -1.89
SHC1P29353 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.25□□□□□ -1.89
SHC1P29353 HMGB1P28-201ENST00000507778 552 ntBASIC3.25□□□□□ -1.89
SHC1P29353 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.25□□□□□ -1.89
SHC1P29353 SNORA48.10-201ENST00000516965 160 ntBASIC3.25□□□□□ -1.89
SHC1P29353 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
SHC1P29353 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.25□□□□□ -1.89
SHC1P29353 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.25□□□□□ -1.89
SHC1P29353 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.25□□□□□ -1.89
SHC1P29353 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.25□□□□□ -1.89
SHC1P29353 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.25□□□□□ -1.89
SHC1P29353 CENPUP2-201ENST00000555897 1186 ntBASIC3.25□□□□□ -1.89
SHC1P29353 TGIF1P1-201ENST00000558095 802 ntBASIC3.25□□□□□ -1.89
SHC1P29353 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.25□□□□□ -1.89
SHC1P29353 MIR3922-201ENST00000585192 84 ntBASIC3.25□□□□□ -1.89
SHC1P29353 AC022146.1-201ENST00000595307 847 ntBASIC3.25□□□□□ -1.89
SHC1P29353 AC008687.2-201ENST00000597865 520 ntBASIC3.25□□□□□ -1.89
SHC1P29353 VN1R92P-201ENST00000598511 928 ntBASIC3.25□□□□□ -1.89
SHC1P29353 AC078795.2-201ENST00000602835 1252 ntBASIC3.25□□□□□ -1.89
SHC1P29353 AC006077.1-201ENST00000604746 343 ntBASIC3.25□□□□□ -1.89
SHC1P29353 AC091946.2-201ENST00000606105 291 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms