Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC011825.1-201ENST00000484967 388 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFSF4P23510 AC091133.4-201ENST00000511142 308 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFSF4P23510 RNU6-390P-201ENST00000516259 103 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 AC022616.3-201ENST00000523940 148 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 FAM60DP-201ENST00000524174 632 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 MTCYBP20-201ENST00000524239 1129 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFSF4P23510 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFSF4P23510 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.04□□□□□ -1.76
TNFSF4P23510 AL355836.1-201ENST00000555951 870 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 AC245505.1-201ENST00000556398 224 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 MIR3167-201ENST00000579623 85 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFSF4P23510 AP001029.3-201ENST00000588063 596 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.04□□□□□ -1.76
TNFSF4P23510 AC020910.2-201ENST00000603635 610 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 AC136475.10-201ENST00000620253 385 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 AC244100.1-202ENST00000621554 382 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
TNFSF4P23510 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFSF4P23510 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TNFSF4P23510 MTND5P29-201ENST00000458676 1807 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 AC092435.4-201ENST00000623012 4159 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
TNFSF4P23510 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TNFSF4P23510 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFSF4P23510 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TNFSF4P23510 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.03□□□□□ -1.76
TNFSF4P23510 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.03□□□□□ -1.76
TNFSF4P23510 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.03□□□□□ -1.76
TNFSF4P23510 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFSF4P23510 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TNFSF4P23510 RNA5SP191-201ENST00000362585 102 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFSF4P23510 AP000580.1-201ENST00000404439 358 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.03□□□□□ -1.76
TNFSF4P23510 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.03□□□□□ -1.76
TNFSF4P23510 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.03□□□□□ -1.76
TNFSF4P23510 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.03□□□□□ -1.76
TNFSF4P23510 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.03□□□□□ -1.76
TNFSF4P23510 E2F6P2-201ENST00000420708 748 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 RGS17P1-201ENST00000423358 553 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 EIF4HP2-201ENST00000424380 563 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.03□□□□□ -1.76
TNFSF4P23510 AL356867.1-201ENST00000429623 299 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 AL049745.1-201ENST00000433953 286 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 AC079448.1-201ENST00000449377 373 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 AC140076.1-201ENST00000449897 361 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 RAD23BP3-201ENST00000454157 1152 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 HMGN2P16-201ENST00000456802 261 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 AC106872.2-201ENST00000494303 480 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 SCARNA22-201ENST00000503991 125 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 AC091868.1-201ENST00000508746 304 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.03□□□□□ -1.76
TNFSF4P23510 AC010493.1-201ENST00000513479 292 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 SNORA70.16-201ENST00000516390 95 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
TNFSF4P23510 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.03□□□□□ -1.76
TNFSF4P23510 AC022880.1-201ENST00000534017 973 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.03□□□□□ -1.76
TNFSF4P23510 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.03□□□□□ -1.76
TNFSF4P23510 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.03□□□□□ -1.76
TNFSF4P23510 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.03□□□□□ -1.76
TNFSF4P23510 AP005205.1-201ENST00000563503 508 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.03□□□□□ -1.76
TNFSF4P23510 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.03□□□□□ -1.76
TNFSF4P23510 EIF1P4-201ENST00000572664 335 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 RN7SL652P-201ENST00000577769 300 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.03□□□□□ -1.76
TNFSF4P23510 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.03□□□□□ -1.76
TNFSF4P23510 SNORD91B-202ENST00000608459 222 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 AL161616.1-201ENST00000611867 286 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 MIR6853-201ENST00000619642 74 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 AC073534.2-201ENST00000620377 381 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 AC110801.1-201ENST00000623590 212 ntBASIC4.03□□□□□ -1.76
TNFSF4P23510 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TNFSF4P23510 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFSF4P23510 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFSF4P23510 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.02□□□□□ -1.77
TNFSF4P23510 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
TNFSF4P23510 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFSF4P23510 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFSF4P23510 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
TNFSF4P23510 MTND5P26-201ENST00000426018 1752 ntBASIC4.02□□□□□ -1.77
TNFSF4P23510 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFSF4P23510 SNORD56.2-201ENST00000363242 71 ntBASIC4.02□□□□□ -1.77
TNFSF4P23510 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.02□□□□□ -1.77
TNFSF4P23510 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
TNFSF4P23510 RNU1-39P-201ENST00000383897 165 ntBASIC4.02□□□□□ -1.77
TNFSF4P23510 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.02□□□□□ -1.77
TNFSF4P23510 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.02□□□□□ -1.77
TNFSF4P23510 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.02□□□□□ -1.77
TNFSF4P23510 AC005154.2-201ENST00000438110 379 ntBASIC4.02□□□□□ -1.77
TNFSF4P23510 BTF3P6-201ENST00000448054 499 ntBASIC4.02□□□□□ -1.77
TNFSF4P23510 MTND2P24-201ENST00000453434 806 ntBASIC4.02□□□□□ -1.77
TNFSF4P23510 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms