Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.4□□□□□ -2.02
COL5A1P20908 ARL5AP3-201ENST00000439327 386 ntBASIC2.4□□□□□ -2.02
COL5A1P20908 AC124916.1-201ENST00000444020 547 ntBASIC2.4□□□□□ -2.02
COL5A1P20908 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
COL5A1P20908 CEACAMP4-201ENST00000457676 421 ntBASIC2.4□□□□□ -2.02
COL5A1P20908 OR4G11P-201ENST00000492842 939 ntBASIC2.4□□□□□ -2.02
COL5A1P20908 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.4□□□□□ -2.02
COL5A1P20908 MTATP6P9-201ENST00000515039 680 ntBASIC2.4□□□□□ -2.02
COL5A1P20908 AC110760.3-202ENST00000515177 371 ntBASIC2.4□□□□□ -2.02
COL5A1P20908 RN7SKP219-201ENST00000516825 296 ntBASIC2.4□□□□□ -2.02
COL5A1P20908 AC067904.2-201ENST00000517322 1283 ntBASIC2.4□□□□□ -2.02
COL5A1P20908 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.4□□□□□ -2.02
COL5A1P20908 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.4□□□□□ -2.02
COL5A1P20908 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.4□□□□□ -2.02
COL5A1P20908 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.4□□□□□ -2.02
COL5A1P20908 AL355802.4-201ENST00000607635 548 ntBASIC2.4□□□□□ -2.02
COL5A1P20908 AC116447.1-201ENST00000613153 453 ntBASIC2.4□□□□□ -2.02
COL5A1P20908 AC005156.1-201ENST00000613371 573 ntBASIC2.4□□□□□ -2.02
COL5A1P20908 AC091046.2-201ENST00000620775 665 ntBASIC2.4□□□□□ -2.02
COL5A1P20908 RPL23AP61-201ENST00000623642 466 ntBASIC2.4□□□□□ -2.02
COL5A1P20908 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.4□□□□□ -2.02
COL5A1P20908 U6.98-201ENST00000637157 84 ntBASIC2.4□□□□□ -2.02
COL5A1P20908 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
COL5A1P20908 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
COL5A1P20908 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
COL5A1P20908 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
COL5A1P20908 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.4□□□□□ -2.03
COL5A1P20908 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
COL5A1P20908 NSRP1P1-201ENST00000444067 1693 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.4□□□□□ -2.03
COL5A1P20908 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
COL5A1P20908 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
COL5A1P20908 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
COL5A1P20908 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.4□□□□□ -2.03
COL5A1P20908 MORF4L1P6-201ENST00000418771 268 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.4□□□□□ -2.03
COL5A1P20908 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.4□□□□□ -2.03
COL5A1P20908 AC007000.2-201ENST00000442564 487 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 HIGD1AP2-201ENST00000446367 280 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 MTATP6P14-201ENST00000455189 673 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 MTND2P6-201ENST00000455337 1030 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 RPL30P9-201ENST00000465586 330 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 HAUS1P1-201ENST00000505275 832 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 MTCO1P31-201ENST00000506355 492 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.4□□□□□ -2.03
COL5A1P20908 RNU6-1102P-201ENST00000516149 96 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 RNU6-415P-201ENST00000516252 97 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 AC103833.1-201ENST00000517442 172 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.03
COL5A1P20908 IGHV3-76-201ENST00000522465 295 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.4□□□□□ -2.03
COL5A1P20908 RANP3-201ENST00000530970 276 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 OR5D17P-201ENST00000531492 978 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.4□□□□□ -2.03
COL5A1P20908 AC023158.1-201ENST00000561632 1025 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 AC104072.1-201ENST00000568817 668 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 NRBF2P1-201ENST00000587407 859 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 AC245884.10-201ENST00000597355 337 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 ABI1P1-201ENST00000603375 1120 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 AC034236.3-201ENST00000605999 461 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 AC124016.2-201ENST00000610058 665 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 AC016597.2-201ENST00000613256 341 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 AP006248.3-201ENST00000623580 594 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 OR4G3P-201ENST00000633500 913 ntBASIC2.4□□□□□ -2.03
COL5A1P20908 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL5A1P20908 AC104454.1-201ENST00000421341 1401 ntBASIC2.39□□□□□ -2.03
COL5A1P20908 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL5A1P20908 RNU6-1251P-201ENST00000364502 107 ntBASIC2.39□□□□□ -2.03
COL5A1P20908 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.39□□□□□ -2.03
COL5A1P20908 Y_RNA.508-201ENST00000384502 114 ntBASIC2.39□□□□□ -2.03
COL5A1P20908 EIF5P1-201ENST00000400019 1231 ntBASIC2.39□□□□□ -2.03
COL5A1P20908 SNORD88.1-201ENST00000408684 91 ntBASIC2.39□□□□□ -2.03
COL5A1P20908 AC107081.1-201ENST00000414975 361 ntBASIC2.39□□□□□ -2.03
COL5A1P20908 AC106883.1-201ENST00000418805 562 ntBASIC2.39□□□□□ -2.03
COL5A1P20908 AL009174.1-201ENST00000426577 416 ntBASIC2.39□□□□□ -2.03
COL5A1P20908 RN7SKP210-201ENST00000459176 261 ntBASIC2.39□□□□□ -2.03
COL5A1P20908 AC108729.2-201ENST00000476543 840 ntBASIC2.39□□□□□ -2.03
COL5A1P20908 AC108860.1-201ENST00000484521 383 ntBASIC2.39□□□□□ -2.03
COL5A1P20908 AC092902.1-201ENST00000486999 259 ntBASIC2.39□□□□□ -2.03
COL5A1P20908 AC016550.1-201ENST00000505348 785 ntBASIC2.39□□□□□ -2.03
COL5A1P20908 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.39□□□□□ -2.03
COL5A1P20908 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.39□□□□□ -2.03
COL5A1P20908 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.39□□□□□ -2.03
COL5A1P20908 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.39□□□□□ -2.03
COL5A1P20908 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.39□□□□□ -2.03
COL5A1P20908 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.39□□□□□ -2.03
COL5A1P20908 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.39□□□□□ -2.03
COL5A1P20908 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.39□□□□□ -2.03
COL5A1P20908 AL158211.1-201ENST00000566763 763 ntBASIC2.39□□□□□ -2.03
COL5A1P20908 AL158050.2-201ENST00000605336 568 ntBASIC2.39□□□□□ -2.03
COL5A1P20908 AL353997.5-201ENST00000618886 171 ntBASIC2.39□□□□□ -2.03
COL5A1P20908 AL163051.2-201ENST00000618976 735 ntBASIC2.39□□□□□ -2.03
COL5A1P20908 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.39□□□□□ -2.03
COL5A1P20908 AC004808.1-201ENST00000627671 721 ntBASIC2.39□□□□□ -2.03
COL5A1P20908 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.39□□□□□ -2.03
COL5A1P20908 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.39□□□□□ -2.03
COL5A1P20908 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
COL5A1P20908 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
COL5A1P20908 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
COL5A1P20908 RPL9P7-201ENST00000330965 580 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms