Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.2□□□□□ -1.9
XRCC1P18887 AC146507.2-201ENST00000460608 476 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
XRCC1P18887 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.2□□□□□ -1.9
XRCC1P18887 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.2□□□□□ -1.9
XRCC1P18887 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.2□□□□□ -1.9
XRCC1P18887 AC109635.4-202ENST00000531666 412 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 RPL21P12-201ENST00000559810 515 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
XRCC1P18887 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.2□□□□□ -1.9
XRCC1P18887 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.2□□□□□ -1.9
XRCC1P18887 MIR5004-201ENST00000579078 107 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.2□□□□□ -1.9
XRCC1P18887 RPL23AP92-201ENST00000603609 255 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 AC069431.2-201ENST00000604149 1099 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.2□□□□□ -1.9
XRCC1P18887 AC006329.2-201ENST00000611491 394 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 AL138478.1-201ENST00000612252 832 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 PART1_2.1-201ENST00000612397 250 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 AC024257.5-201ENST00000612739 531 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 AC084824.4-201ENST00000620106 731 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 MIR8057-201ENST00000620957 69 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 AC006963.1-201ENST00000624003 1052 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 CYP3A51P-201ENST00000633513 256 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 MAPK10-362ENST00000641864 4484 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
XRCC1P18887 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
XRCC1P18887 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
XRCC1P18887 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
XRCC1P18887 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
XRCC1P18887 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.19□□□□□ -1.9
XRCC1P18887 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
XRCC1P18887 AC093831.2-201ENST00000624393 3427 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 RPL23AP47-201ENST00000408017 460 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
XRCC1P18887 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.19□□□□□ -1.9
XRCC1P18887 MTCO3P12-201ENST00000416718 547 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 AL354692.1-201ENST00000423044 315 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.19□□□□□ -1.9
XRCC1P18887 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.19□□□□□ -1.9
XRCC1P18887 AC115115.1-201ENST00000449927 248 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 RPS24P6-201ENST00000452670 400 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.19□□□□□ -1.9
XRCC1P18887 snoU109.4-201ENST00000458953 143 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 snoU13.24-201ENST00000458998 104 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 RN7SL75P-201ENST00000461926 281 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 RPL21P104-201ENST00000464143 478 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 AC017015.1-201ENST00000477387 286 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 PRELID3BP6-201ENST00000503839 571 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 HMGB1P22-201ENST00000505315 124 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 AC119751.4-201ENST00000507498 357 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 AC010460.2-201ENST00000509054 677 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 RNA5SP217-201ENST00000515959 91 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.19□□□□□ -1.9
XRCC1P18887 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
XRCC1P18887 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.19□□□□□ -1.9
XRCC1P18887 OR4T1P-201ENST00000554933 911 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 AC021749.1-201ENST00000604322 607 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 AC128687.1-201ENST00000605304 619 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 AP001521.1-201ENST00000609150 300 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 AL391834.2-201ENST00000609982 546 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 AL590282.1-201ENST00000610379 1136 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 uc_338.1-201ENST00000612113 180 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 AL157817.1-201ENST00000614264 790 ntBASIC3.19□□□□□ -1.9
XRCC1P18887 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.19□□□□□ -1.9
XRCC1P18887 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.19□□□□□ -1.9
XRCC1P18887 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.19□□□□□ -1.9
XRCC1P18887 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.19□□□□□ -1.9
XRCC1P18887 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
XRCC1P18887 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
XRCC1P18887 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
XRCC1P18887 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
XRCC1P18887 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 AC244517.1-201ENST00000606030 2086 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
XRCC1P18887 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.18□□□□□ -1.9
XRCC1P18887 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
XRCC1P18887 RNU6-1249P-201ENST00000363237 111 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
XRCC1P18887 RNU6-629P-201ENST00000384061 103 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 MIR122-201ENST00000385044 85 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 MIR483-201ENST00000385070 76 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 RNU2-71P-201ENST00000411395 189 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 AC063979.1-201ENST00000415539 377 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.18□□□□□ -1.9
XRCC1P18887 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.18□□□□□ -1.9
XRCC1P18887 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.18□□□□□ -1.9
XRCC1P18887 MRPS36P1-201ENST00000421291 307 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 VDAC1P3-201ENST00000434069 851 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.18□□□□□ -1.9
XRCC1P18887 AC009969.1-201ENST00000438726 172 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.18□□□□□ -1.9
XRCC1P18887 VN1R10P-201ENST00000447106 875 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.18□□□□□ -1.9
XRCC1P18887 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.18□□□□□ -1.9
XRCC1P18887 AC109925.1-201ENST00000478069 331 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 AC108734.3-201ENST00000481241 1165 ntBASIC3.18□□□□□ -1.9
XRCC1P18887 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.18□□□□□ -1.9
XRCC1P18887 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.18□□□□□ -1.9
XRCC1P18887 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms