Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC025754.2-201ENST00000606491 432 ntBASIC2.1□□□□□ -2.07
HMGA1P17096 AC123768.4-201ENST00000616244 701 ntBASIC2.1□□□□□ -2.07
HMGA1P17096 AC025125.1-201ENST00000624743 1922 ntBASIC2.1□□□□□ -2.07
HMGA1P17096 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.1□□□□□ -2.07
HMGA1P17096 AC012321.1-201ENST00000561622 1588 ntBASIC2.1□□□□□ -2.07
HMGA1P17096 AP006437.1-201ENST00000641440 3685 ntBASIC2.1□□□□□ -2.07
HMGA1P17096 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.09□□□□□ -2.07
HMGA1P17096 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.09□□□□□ -2.07
HMGA1P17096 ZNF720P1-201ENST00000562403 1939 ntBASIC2.09□□□□□ -2.07
HMGA1P17096 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.09□□□□□ -2.07
HMGA1P17096 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HMGA1P17096 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
HMGA1P17096 AC129850.1-201ENST00000436203 508 ntBASIC2.09□□□□□ -2.07
HMGA1P17096 RPL7P52-201ENST00000449200 742 ntBASIC2.09□□□□□ -2.07
HMGA1P17096 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGA1P17096 FABP5P13-201ENST00000452144 328 ntBASIC2.09□□□□□ -2.07
HMGA1P17096 SNORD108-201ENST00000459332 71 ntBASIC2.09□□□□□ -2.07
HMGA1P17096 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.09□□□□□ -2.07
HMGA1P17096 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.09□□□□□ -2.07
HMGA1P17096 AC068339.2-201ENST00000534395 618 ntBASIC2.09□□□□□ -2.07
HMGA1P17096 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGA1P17096 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.09□□□□□ -2.07
HMGA1P17096 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.09□□□□□ -2.07
HMGA1P17096 AL450472.3-201ENST00000615578 367 ntBASIC2.09□□□□□ -2.07
HMGA1P17096 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
HMGA1P17096 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HMGA1P17096 MIRLET7G-201ENST00000362280 84 ntBASIC2.08□□□□□ -2.08
HMGA1P17096 VTRNA1-1-201ENST00000363120 99 ntBASIC2.08□□□□□ -2.08
HMGA1P17096 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HMGA1P17096 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.08□□□□□ -2.08
HMGA1P17096 AC007677.1-201ENST00000445757 515 ntBASIC2.08□□□□□ -2.08
HMGA1P17096 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HMGA1P17096 AL035551.1-201ENST00000446931 348 ntBASIC2.08□□□□□ -2.08
HMGA1P17096 HMGN2P23-201ENST00000456759 269 ntBASIC2.08□□□□□ -2.08
HMGA1P17096 ARPC3P2-201ENST00000457786 533 ntBASIC2.08□□□□□ -2.08
HMGA1P17096 RNU7-157P-201ENST00000459600 66 ntBASIC2.08□□□□□ -2.08
HMGA1P17096 RPL23AP42-201ENST00000471152 471 ntBASIC2.08□□□□□ -2.08
HMGA1P17096 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.08□□□□□ -2.08
HMGA1P17096 AC109486.1-201ENST00000486833 374 ntBASIC2.08□□□□□ -2.08
HMGA1P17096 AC108210.2-201ENST00000503681 201 ntBASIC2.08□□□□□ -2.08
HMGA1P17096 RNU6-295P-201ENST00000516901 104 ntBASIC2.08□□□□□ -2.08
HMGA1P17096 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.08□□□□□ -2.08
HMGA1P17096 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HMGA1P17096 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.08□□□□□ -2.08
HMGA1P17096 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGA1P17096 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGA1P17096 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.08□□□□□ -2.08
HMGA1P17096 SNRPGP19-201ENST00000603826 189 ntBASIC2.08□□□□□ -2.08
HMGA1P17096 MIR6845-201ENST00000613182 61 ntBASIC2.08□□□□□ -2.08
HMGA1P17096 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.08□□□□□ -2.08
HMGA1P17096 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.08□□□□□ -2.08
HMGA1P17096 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.08□□□□□ -2.08
HMGA1P17096 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HMGA1P17096 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HMGA1P17096 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HMGA1P17096 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.07□□□□□ -2.08
HMGA1P17096 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
HMGA1P17096 FAM133CP-201ENST00000332869 704 ntBASIC2.07□□□□□ -2.08
HMGA1P17096 SNORA26.9-201ENST00000391322 122 ntBASIC2.07□□□□□ -2.08
HMGA1P17096 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HMGA1P17096 HMGB1P10-201ENST00000395823 563 ntBASIC2.07□□□□□ -2.08
HMGA1P17096 DHFRP5-201ENST00000406944 564 ntBASIC2.07□□□□□ -2.08
HMGA1P17096 AF274854.1-201ENST00000413236 615 ntBASIC2.07□□□□□ -2.08
HMGA1P17096 FNDC3CP-201ENST00000420795 1155 ntBASIC2.07□□□□□ -2.08
HMGA1P17096 MTCO3P30-201ENST00000426425 670 ntBASIC2.07□□□□□ -2.08
HMGA1P17096 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGA1P17096 HMGN2P20-201ENST00000437531 273 ntBASIC2.07□□□□□ -2.08
HMGA1P17096 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGA1P17096 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGA1P17096 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGA1P17096 AC103810.1-201ENST00000579873 453 ntBASIC2.07□□□□□ -2.08
HMGA1P17096 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGA1P17096 AP001521.1-201ENST00000609150 300 ntBASIC2.07□□□□□ -2.08
HMGA1P17096 AL589935.2-201ENST00000616471 1231 ntBASIC2.07□□□□□ -2.08
HMGA1P17096 AC009318.3-201ENST00000616916 503 ntBASIC2.07□□□□□ -2.08
HMGA1P17096 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.07□□□□□ -2.08
HMGA1P17096 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
HMGA1P17096 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.07□□□□□ -2.08
HMGA1P17096 CR382285.2-201ENST00000624662 1495 ntBASIC2.07□□□□□ -2.08
HMGA1P17096 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
HMGA1P17096 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.06□□□□□ -2.08
HMGA1P17096 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
HMGA1P17096 RNA5SP37-201ENST00000365420 130 ntBASIC2.06□□□□□ -2.08
HMGA1P17096 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HMGA1P17096 RNU6-1140P-201ENST00000410517 106 ntBASIC2.06□□□□□ -2.08
HMGA1P17096 CYCSP49-201ENST00000420810 319 ntBASIC2.06□□□□□ -2.08
HMGA1P17096 RPS7P5-201ENST00000441482 581 ntBASIC2.06□□□□□ -2.08
HMGA1P17096 AC073901.1-201ENST00000462471 408 ntBASIC2.06□□□□□ -2.08
HMGA1P17096 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.06□□□□□ -2.08
HMGA1P17096 RNA5SP182-201ENST00000516064 82 ntBASIC2.06□□□□□ -2.08
HMGA1P17096 AC025881.1-201ENST00000518851 512 ntBASIC2.06□□□□□ -2.08
HMGA1P17096 AC110588.1-201ENST00000559699 137 ntBASIC2.06□□□□□ -2.08
HMGA1P17096 AC010735.1-201ENST00000567305 1026 ntBASIC2.06□□□□□ -2.08
HMGA1P17096 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGA1P17096 MIR4512-201ENST00000583257 77 ntBASIC2.06□□□□□ -2.08
HMGA1P17096 AL022099.1-201ENST00000604551 712 ntBASIC2.06□□□□□ -2.08
HMGA1P17096 DCAF13P3-201ENST00000561147 1334 ntBASIC2.06□□□□□ -2.08
HMGA1P17096 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HMGA1P17096 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HMGA1P17096 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms