Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AL627390.1-201ENST00000396055 340 ntBASIC2.07□□□□□ -2.08
VCANP13611 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.07□□□□□ -2.08
VCANP13611 RNU6-250P-201ENST00000516958 103 ntBASIC2.07□□□□□ -2.08
VCANP13611 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VCANP13611 AC073136.2-201ENST00000417282 849 ntBASIC2.06□□□□□ -2.08
VCANP13611 AC008173.1-201ENST00000418901 264 ntBASIC2.06□□□□□ -2.08
VCANP13611 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.06□□□□□ -2.08
VCANP13611 Z99714.1-201ENST00000450463 807 ntBASIC2.06□□□□□ -2.08
VCANP13611 AC006390.1-201ENST00000508068 283 ntBASIC2.06□□□□□ -2.08
VCANP13611 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.06□□□□□ -2.08
VCANP13611 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.06□□□□□ -2.08
VCANP13611 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.06□□□□□ -2.08
VCANP13611 OR10AB1P-201ENST00000609613 938 ntBASIC2.06□□□□□ -2.08
VCANP13611 AC245100.2-201ENST00000454544 1679 ntBASIC2.06□□□□□ -2.08
VCANP13611 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.06□□□□□ -2.08
VCANP13611 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VCANP13611 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VCANP13611 YWHAZP7-201ENST00000436906 631 ntBASIC2.06□□□□□ -2.08
VCANP13611 KATNBL1P3-201ENST00000443475 909 ntBASIC2.06□□□□□ -2.08
VCANP13611 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.06□□□□□ -2.08
VCANP13611 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.06□□□□□ -2.08
VCANP13611 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
VCANP13611 AC009501.3-201ENST00000605001 1352 ntBASIC2.06□□□□□ -2.08
VCANP13611 Y_RNA.681-201ENST00000516445 113 ntBASIC2.06□□□□□ -2.08
VCANP13611 RNA5SP337-201ENST00000517007 109 ntBASIC2.06□□□□□ -2.08
VCANP13611 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.06□□□□□ -2.08
VCANP13611 AC025281.1-201ENST00000567026 265 ntBASIC2.06□□□□□ -2.08
VCANP13611 AC006116.7-201ENST00000590141 756 ntBASIC2.06□□□□□ -2.08
VCANP13611 OR5H15-201ENST00000383696 930 ntBASIC2.05□□□□□ -2.08
VCANP13611 MIR548J-201ENST00000408833 112 ntBASIC2.05□□□□□ -2.08
VCANP13611 RPS15AP6-201ENST00000420703 385 ntBASIC2.05□□□□□ -2.08
VCANP13611 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.05□□□□□ -2.08
VCANP13611 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.05□□□□□ -2.08
VCANP13611 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.05□□□□□ -2.08
VCANP13611 AC006378.2-201ENST00000623178 2476 ntBASIC2.05□□□□□ -2.08
VCANP13611 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VCANP13611 Y_RNA.393-201ENST00000383936 102 ntBASIC2.05□□□□□ -2.08
VCANP13611 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VCANP13611 RPL23AP14-201ENST00000468281 468 ntBASIC2.05□□□□□ -2.08
VCANP13611 AC011352.3-201ENST00000505162 593 ntBASIC2.05□□□□□ -2.08
VCANP13611 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.05□□□□□ -2.08
VCANP13611 RNA5SP76-201ENST00000516277 87 ntBASIC2.05□□□□□ -2.08
VCANP13611 AP003467.2-201ENST00000520175 319 ntBASIC2.05□□□□□ -2.08
VCANP13611 AP001804.3-201ENST00000525146 880 ntBASIC2.05□□□□□ -2.08
VCANP13611 SNRPGP19-201ENST00000603826 189 ntBASIC2.05□□□□□ -2.08
VCANP13611 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VCANP13611 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
VCANP13611 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VCANP13611 AL356806.1-201ENST00000422524 916 ntBASIC2.04□□□□□ -2.08
VCANP13611 AL390023.1-201ENST00000428836 262 ntBASIC2.04□□□□□ -2.08
VCANP13611 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.04□□□□□ -2.08
VCANP13611 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.04□□□□□ -2.08
VCANP13611 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC2.04□□□□□ -2.08
VCANP13611 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.04□□□□□ -2.08
VCANP13611 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.04□□□□□ -2.08
VCANP13611 AL160394.1-201ENST00000624765 724 ntBASIC2.04□□□□□ -2.08
VCANP13611 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VCANP13611 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VCANP13611 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.04□□□□□ -2.08
VCANP13611 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
VCANP13611 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
VCANP13611 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.04□□□□□ -2.08
VCANP13611 AL391646.1-201ENST00000603860 190 ntBASIC2.04□□□□□ -2.08
VCANP13611 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC2.04□□□□□ -2.08
VCANP13611 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
VCANP13611 AC008264.2-201ENST00000610193 3731 ntBASIC2.04□□□□□ -2.08
VCANP13611 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
VCANP13611 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
VCANP13611 AL353746.1-201ENST00000566293 6881 ntBASIC2.03□□□□□ -2.08
VCANP13611 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
VCANP13611 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.03□□□□□ -2.08
VCANP13611 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.03□□□□□ -2.08
VCANP13611 OR4R2P-201ENST00000530815 597 ntBASIC2.03□□□□□ -2.08
VCANP13611 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.03□□□□□ -2.08
VCANP13611 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
VCANP13611 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VCANP13611 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC2.03□□□□□ -2.08
VCANP13611 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
VCANP13611 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.03□□□□□ -2.08
VCANP13611 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.03□□□□□ -2.08
VCANP13611 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
VCANP13611 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
VCANP13611 RNU6-53P-201ENST00000365367 106 ntBASIC2.02□□□□□ -2.09
VCANP13611 Y_RNA.433-201ENST00000384089 102 ntBASIC2.02□□□□□ -2.09
VCANP13611 AL035405.1-201ENST00000400795 710 ntBASIC2.02□□□□□ -2.09
VCANP13611 AL445685.2-201ENST00000422551 342 ntBASIC2.02□□□□□ -2.09
VCANP13611 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.02□□□□□ -2.09
VCANP13611 CDC42P1-201ENST00000456658 548 ntBASIC2.02□□□□□ -2.09
VCANP13611 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
VCANP13611 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.02□□□□□ -2.09
VCANP13611 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.02□□□□□ -2.09
VCANP13611 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.02□□□□□ -2.09
VCANP13611 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.02□□□□□ -2.09
VCANP13611 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
VCANP13611 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
VCANP13611 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
VCANP13611 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
VCANP13611 AC006971.1-201ENST00000407916 4486 ntBASIC2.02□□□□□ -2.09
VCANP13611 SNORD21-201ENST00000383953 95 ntBASIC2.02□□□□□ -2.09
VCANP13611 SRIP3-201ENST00000413200 219 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms