Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXC6P09630 PABPC1P9-201ENST00000426076 1612 ntBASIC4.09□□□□□ -1.76
HOXC6P09630 MFSD8-233ENST00000641482 4860 ntBASIC4.09□□□□□ -1.76
HOXC6P09630 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXC6P09630 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXC6P09630 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXC6P09630 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HOXC6P09630 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXC6P09630 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXC6P09630 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXC6P09630 SNORA38.1-201ENST00000364172 131 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 SUGT1P1-201ENST00000379514 476 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 SNORD17-201ENST00000390930 237 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 RPL23AP29-201ENST00000397284 453 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
HOXC6P09630 MTHFD2P2-201ENST00000407725 247 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 RNA5SP39-201ENST00000411245 120 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 RNU6-603P-201ENST00000411403 107 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXC6P09630 FCF1P2-201ENST00000415284 583 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 AC104651.1-201ENST00000427559 735 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 AC017083.1-201ENST00000428093 483 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 NANOGP6-201ENST00000429190 847 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXC6P09630 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXC6P09630 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXC6P09630 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.08□□□□□ -1.76
HOXC6P09630 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXC6P09630 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXC6P09630 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
HOXC6P09630 MTND6P6-201ENST00000478031 263 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
HOXC6P09630 AC109927.2-201ENST00000506416 303 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 HMGB1P28-201ENST00000507778 552 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
HOXC6P09630 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXC6P09630 COX6B1P6-201ENST00000522347 255 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 AP001207.1-201ENST00000524051 481 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
HOXC6P09630 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXC6P09630 AC018552.3-201ENST00000567416 561 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 MIR548AB-201ENST00000584917 84 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 AP003465.2-201ENST00000602571 373 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 PSMA6P4-201ENST00000603247 718 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 AC068276.1-201ENST00000605793 379 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 AC092794.1-201ENST00000612734 582 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 AC008498.1-201ENST00000613012 531 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 AC009237.17-201ENST00000618111 748 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 AL732618.1-201ENST00000623251 301 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 AL160394.1-201ENST00000624765 724 ntBASIC4.08□□□□□ -1.76
HOXC6P09630 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXC6P09630 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HOXC6P09630 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HOXC6P09630 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HOXC6P09630 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXC6P09630 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HOXC6P09630 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC6P09630 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC6P09630 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXC6P09630 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC6P09630 RPL21P132-201ENST00000331267 462 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 MIR92A2-201ENST00000385299 75 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 U3.19-201ENST00000390893 196 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXC6P09630 DBIP2-201ENST00000419076 262 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 AC093698.1-201ENST00000423843 571 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXC6P09630 RPS24P8-201ENST00000431490 402 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 B3GNT2P1-201ENST00000434960 952 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 AL512286.1-201ENST00000439244 400 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 AC133473.1-201ENST00000455173 299 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 DNAJC19P1-201ENST00000455312 319 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 AC093899.1-201ENST00000457984 376 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXC6P09630 U3.44-201ENST00000458938 192 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 AC023598.1-201ENST00000472521 361 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 TRBV12-2-201ENST00000489763 344 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXC6P09630 MTCYBP17-201ENST00000503579 789 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXC6P09630 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXC6P09630 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXC6P09630 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.07□□□□□ -1.76
HOXC6P09630 RNU6-579P-201ENST00000516879 102 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 SNORA48.10-201ENST00000516965 160 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 RNU6-1261P-201ENST00000517194 104 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 HIGD1AP6-201ENST00000521833 279 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXC6P09630 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC6P09630 EIF1P4-201ENST00000572664 335 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 MIR4801-201ENST00000582704 82 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 AC012493.2-201ENST00000595083 291 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 AC013476.2-201ENST00000614456 459 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 MIR7112-201ENST00000616126 65 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HOXC6P09630 AC025048.6-202ENST00000627667 438 ntBASIC4.07□□□□□ -1.76
HOXC6P09630 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC6P09630 AL079343.1-201ENST00000572358 1771 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms