Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.51□□□□□ -1.85
VIMP08670 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.51□□□□□ -1.85
VIMP08670 AC061975.8-201ENST00000587058 721 ntBASIC3.51□□□□□ -1.85
VIMP08670 AC022916.3-201ENST00000592961 742 ntBASIC3.51□□□□□ -1.85
VIMP08670 BBIP1P1-201ENST00000602999 279 ntBASIC3.51□□□□□ -1.85
VIMP08670 AC092354.2-201ENST00000607786 514 ntBASIC3.51□□□□□ -1.85
VIMP08670 AL357080.1-201ENST00000617394 239 ntBASIC3.51□□□□□ -1.85
VIMP08670 AL445264.1-201ENST00000621719 171 ntBASIC3.51□□□□□ -1.85
VIMP08670 AC095031.1-201ENST00000623685 672 ntBASIC3.51□□□□□ -1.85
VIMP08670 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.51□□□□□ -1.85
VIMP08670 OR52H1-202ENST00000641796 1061 ntBASIC3.51□□□□□ -1.85
VIMP08670 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.51□□□□□ -1.85
VIMP08670 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.51□□□□□ -1.85
VIMP08670 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VIMP08670 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VIMP08670 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VIMP08670 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VIMP08670 MIR135A2-201ENST00000384854 100 ntBASIC3.5□□□□□ -1.85
VIMP08670 MIR585-201ENST00000384887 94 ntBASIC3.5□□□□□ -1.85
VIMP08670 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.5□□□□□ -1.85
VIMP08670 RPL26P29-201ENST00000415623 438 ntBASIC3.5□□□□□ -1.85
VIMP08670 SSXP9-201ENST00000417503 292 ntBASIC3.5□□□□□ -1.85
VIMP08670 HMGB1P49-201ENST00000418882 569 ntBASIC3.5□□□□□ -1.85
VIMP08670 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.5□□□□□ -1.85
VIMP08670 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.5□□□□□ -1.85
VIMP08670 AL353705.1-201ENST00000433468 480 ntBASIC3.5□□□□□ -1.85
VIMP08670 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.5□□□□□ -1.85
VIMP08670 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.5□□□□□ -1.85
VIMP08670 MTND5P14-201ENST00000441481 1267 ntBASIC3.5□□□□□ -1.85
VIMP08670 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.5□□□□□ -1.85
VIMP08670 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.5□□□□□ -1.85
VIMP08670 EEF1E1P1-201ENST00000446998 430 ntBASIC3.5□□□□□ -1.85
VIMP08670 AC002381.1-201ENST00000447049 280 ntBASIC3.5□□□□□ -1.85
VIMP08670 AC093392.2-201ENST00000450682 337 ntBASIC3.5□□□□□ -1.85
VIMP08670 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.5□□□□□ -1.85
VIMP08670 RPL23AP67-201ENST00000465341 474 ntBASIC3.5□□□□□ -1.85
VIMP08670 AC020898.1-201ENST00000474167 787 ntBASIC3.5□□□□□ -1.85
VIMP08670 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.5□□□□□ -1.85
VIMP08670 AL139099.1-201ENST00000497398 403 ntBASIC3.5□□□□□ -1.85
VIMP08670 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.5□□□□□ -1.85
VIMP08670 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.5□□□□□ -1.85
VIMP08670 SNORA31.8-201ENST00000516327 108 ntBASIC3.5□□□□□ -1.85
VIMP08670 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VIMP08670 CYCSP30-201ENST00000546447 172 ntBASIC3.5□□□□□ -1.85
VIMP08670 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VIMP08670 AC120057.2-201ENST00000571520 271 ntBASIC3.5□□□□□ -1.85
VIMP08670 AC090615.1-201ENST00000577519 154 ntBASIC3.5□□□□□ -1.85
VIMP08670 OR4K8P-201ENST00000578842 1048 ntBASIC3.5□□□□□ -1.85
VIMP08670 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VIMP08670 MIR3939-201ENST00000582614 106 ntBASIC3.5□□□□□ -1.85
VIMP08670 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.5□□□□□ -1.85
VIMP08670 MIR4760-201ENST00000585040 80 ntBASIC3.5□□□□□ -1.85
VIMP08670 AC068790.4-201ENST00000602474 263 ntBASIC3.5□□□□□ -1.85
VIMP08670 AL022099.1-201ENST00000604551 712 ntBASIC3.5□□□□□ -1.85
VIMP08670 AL451086.1-201ENST00000605596 223 ntBASIC3.5□□□□□ -1.85
VIMP08670 AC107952.2-201ENST00000606048 486 ntBASIC3.5□□□□□ -1.85
VIMP08670 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.5□□□□□ -1.85
VIMP08670 AC004832.5-201ENST00000608677 401 ntBASIC3.5□□□□□ -1.85
VIMP08670 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.5□□□□□ -1.85
VIMP08670 AC023510.2-201ENST00000622162 746 ntBASIC3.5□□□□□ -1.85
VIMP08670 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.5□□□□□ -1.85
VIMP08670 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.5□□□□□ -1.85
VIMP08670 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
VIMP08670 SGO1P2-201ENST00000429458 1589 ntBASIC3.5□□□□□ -1.85
VIMP08670 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VIMP08670 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
VIMP08670 RLIMP1-201ENST00000339626 1680 ntBASIC3.49□□□□□ -1.85
VIMP08670 FAM35CP-201ENST00000554755 2470 ntBASIC3.49□□□□□ -1.85
VIMP08670 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VIMP08670 AC008264.2-201ENST00000610193 3731 ntBASIC3.49□□□□□ -1.85
VIMP08670 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VIMP08670 FAM133CP-201ENST00000332869 704 ntBASIC3.49□□□□□ -1.85
VIMP08670 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VIMP08670 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
VIMP08670 RNU1-32P-201ENST00000363937 159 ntBASIC3.49□□□□□ -1.85
VIMP08670 RNU6-157P-201ENST00000383957 107 ntBASIC3.49□□□□□ -1.85
VIMP08670 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
VIMP08670 MIR937-201ENST00000401271 86 ntBASIC3.49□□□□□ -1.85
VIMP08670 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.49□□□□□ -1.85
VIMP08670 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.49□□□□□ -1.85
VIMP08670 AL008987.1-201ENST00000415528 237 ntBASIC3.49□□□□□ -1.85
VIMP08670 AL356968.1-201ENST00000416622 474 ntBASIC3.49□□□□□ -1.85
VIMP08670 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.49□□□□□ -1.85
VIMP08670 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.49□□□□□ -1.85
VIMP08670 YPEL5P1-201ENST00000419731 367 ntBASIC3.49□□□□□ -1.85
VIMP08670 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.49□□□□□ -1.85
VIMP08670 AL139247.1-201ENST00000422768 325 ntBASIC3.49□□□□□ -1.85
VIMP08670 ISCA1P2-201ENST00000438679 421 ntBASIC3.49□□□□□ -1.85
VIMP08670 Z73417.1-201ENST00000447373 778 ntBASIC3.49□□□□□ -1.85
VIMP08670 UBDP1-202ENST00000457888 382 ntBASIC3.49□□□□□ -1.85
VIMP08670 RN7SL594P-201ENST00000470590 287 ntBASIC3.49□□□□□ -1.85
VIMP08670 AC006483.1-201ENST00000487308 313 ntBASIC3.49□□□□□ -1.85
VIMP08670 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.49□□□□□ -1.85
VIMP08670 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.49□□□□□ -1.85
VIMP08670 AC093281.2-201ENST00000510153 597 ntBASIC3.49□□□□□ -1.85
VIMP08670 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.49□□□□□ -1.85
VIMP08670 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.49□□□□□ -1.85
VIMP08670 AC245166.1-201ENST00000521012 253 ntBASIC3.49□□□□□ -1.85
VIMP08670 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.49□□□□□ -1.85
VIMP08670 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms