Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DOAP06340 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DOAP06340 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DOAP06340 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DOAP06340 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DOAP06340 DUXAP4-201ENST00000603046 613 ntBASIC4.67□□□□□ -1.66
HLA-DOAP06340 BCRP9-201ENST00000605312 388 ntBASIC4.67□□□□□ -1.66
HLA-DOAP06340 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DOAP06340 AC063943.3-201ENST00000615562 356 ntBASIC4.67□□□□□ -1.66
HLA-DOAP06340 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
HLA-DOAP06340 AP004289.2-201ENST00000444413 1457 ntBASIC4.67□□□□□ -1.66
HLA-DOAP06340 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DOAP06340 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DOAP06340 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DOAP06340 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DOAP06340 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DOAP06340 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DOAP06340 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DOAP06340 Y_RNA.9-201ENST00000362354 101 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DOAP06340 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DOAP06340 RNU6-876P-201ENST00000391295 104 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 DSTNP4-201ENST00000399472 474 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.66□□□□□ -1.66
HLA-DOAP06340 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DOAP06340 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.66□□□□□ -1.66
HLA-DOAP06340 AC009965.2-201ENST00000425328 970 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 BX890604.2-201ENST00000427883 474 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 HLA-N-201ENST00000437516 135 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 AC073614.1-201ENST00000438690 650 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 AL450263.2-201ENST00000439400 589 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 MTND6P13-201ENST00000443510 523 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 AC112653.1-201ENST00000443851 386 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DOAP06340 MTCO1P48-201ENST00000448024 1096 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 Z82190.1-201ENST00000454534 490 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 MTCO1P42-201ENST00000457379 726 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 RPS20P21-201ENST00000466859 343 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 AC010301.1-201ENST00000473936 355 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 AC021678.1-201ENST00000505195 936 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 PPBPP1-201ENST00000510807 373 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.66□□□□□ -1.66
HLA-DOAP06340 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DOAP06340 OR5AQ1P-201ENST00000527596 927 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 FAM92A1P1-201ENST00000528023 890 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 AP003122.4-201ENST00000530980 758 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DOAP06340 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.66□□□□□ -1.66
HLA-DOAP06340 LARP7P2-201ENST00000575306 125 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 AP001180.3-201ENST00000582221 145 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DOAP06340 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DOAP06340 BNIP3P11-201ENST00000603878 563 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 AC008945.2-201ENST00000606056 604 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 AL158211.4-201ENST00000606988 584 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DOAP06340 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DOAP06340 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
HLA-DOAP06340 AC104260.1-201ENST00000616660 539 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 AC002553.4-201ENST00000616896 331 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 AL359880.1-201ENST00000621879 266 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 AC112200.1-201ENST00000625015 234 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DOAP06340 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DOAP06340 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DOAP06340 AC026523.2-201ENST00000625039 7739 ntBASIC4.66□□□□□ -1.66
HLA-DOAP06340 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DOAP06340 CASC19-280ENST00000642102 1351 ntBASIC4.65□□□□□ -1.66
HLA-DOAP06340 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
HLA-DOAP06340 AC092079.1-201ENST00000558620 1985 ntBASIC4.65□□□□□ -1.66
HLA-DOAP06340 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.65□□□□□ -1.66
HLA-DOAP06340 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
HLA-DOAP06340 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.66
HLA-DOAP06340 AC021242.1-201ENST00000507315 2035 ntBASIC4.65□□□□□ -1.66
HLA-DOAP06340 AC006378.2-201ENST00000623178 2476 ntBASIC4.65□□□□□ -1.66
HLA-DOAP06340 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
HLA-DOAP06340 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DOAP06340 RNA5SP391-201ENST00000363456 119 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DOAP06340 RNU6-921P-201ENST00000384361 107 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DOAP06340 FGF7P8-201ENST00000402994 292 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 GSTA9P-201ENST00000406231 611 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
HLA-DOAP06340 AL139413.1-201ENST00000421309 217 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 ISCA1P6-201ENST00000427740 390 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 USP9YP8-201ENST00000441913 500 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DOAP06340 MTCO3P20-201ENST00000454926 688 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 BX322784.1-201ENST00000455793 1077 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 OR6K1P-201ENST00000456766 971 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DOAP06340 AC091951.2-201ENST00000500762 203 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 AC093809.1-201ENST00000509155 340 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 SNORA20.3-201ENST00000516880 132 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 RNU6-352P-201ENST00000516908 107 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 AC087369.1-201ENST00000520775 996 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 ARL2BPP5-201ENST00000523141 481 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 OR5AP1P-201ENST00000529730 940 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms