Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AC103881.1-201ENST00000603476 538 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AC011468.4-201ENST00000603942 409 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AC007179.3-201ENST00000604976 235 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AC093673.2-201ENST00000609674 331 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AC138932.5-201ENST00000617759 563 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AC018755.4-201ENST00000619715 454 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AP003476.1-201ENST00000623984 516 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 MIR208A-201ENST00000362287 71 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 RNU6-1066P-201ENST00000363573 105 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 SNORA51.2-201ENST00000364595 132 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 SUGT1P1-201ENST00000379514 476 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
HLA-DPB1P04440 RNU6-298P-201ENST00000390888 96 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 RNU6-821P-201ENST00000390995 107 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 TMSB4XP8-201ENST00000402089 135 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AL024474.1-201ENST00000404655 591 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AL590004.2-201ENST00000404787 371 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AP000567.1-201ENST00000406413 156 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.66□□□□□ -1.98
HLA-DPB1P04440 TMSB4XP6-201ENST00000415187 135 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DPB1P04440 HSFY1P1-201ENST00000423928 1178 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 TMSB4XP1-201ENST00000424567 135 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 TRIAP1P1-201ENST00000427062 225 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.66□□□□□ -1.98
HLA-DPB1P04440 RPS29P6-201ENST00000438196 145 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 MTCO1P48-201ENST00000448024 1096 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AC079776.3-201ENST00000450665 370 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 HMGB1P25-201ENST00000468402 607 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 RN7SL807P-201ENST00000470923 297 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 RPS27AP9-201ENST00000477681 438 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AC013828.1-201ENST00000481845 158 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.66□□□□□ -1.98
HLA-DPB1P04440 SNORA19.3-201ENST00000516165 130 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.66□□□□□ -1.98
HLA-DPB1P04440 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AL590282.1-201ENST00000610379 1136 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AC096577.2-201ENST00000611455 153 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AC010975.3-201ENST00000618727 978 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AL157770.1-201ENST00000623049 439 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AC099506.2-201ENST00000623074 221 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AC006963.1-201ENST00000624003 1052 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 AC092184.1-201ENST00000625042 715 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 MIR6733-201ENST00000635723 61 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 MFSD8-245ENST00000641743 948 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
HLA-DPB1P04440 DBF4P1-201ENST00000412976 1892 ntBASIC2.66□□□□□ -1.98
HLA-DPB1P04440 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
HLA-DPB1P04440 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HLA-DPB1P04440 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.66□□□□□ -1.98
HLA-DPB1P04440 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HLA-DPB1P04440 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
HLA-DPB1P04440 NUP58P1-201ENST00000502546 1738 ntBASIC2.65□□□□□ -1.98
HLA-DPB1P04440 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.65□□□□□ -1.98
HLA-DPB1P04440 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.65□□□□□ -1.98
HLA-DPB1P04440 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HLA-DPB1P04440 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HLA-DPB1P04440 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
HLA-DPB1P04440 RNU6-1176P-201ENST00000390955 107 ntBASIC2.65□□□□□ -1.99
HLA-DPB1P04440 RNU6-1300P-201ENST00000391046 108 ntBASIC2.65□□□□□ -1.99
HLA-DPB1P04440 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DPB1P04440 RNU2-28P-201ENST00000410457 189 ntBASIC2.65□□□□□ -1.99
HLA-DPB1P04440 AC092447.6-201ENST00000414578 210 ntBASIC2.65□□□□□ -1.99
HLA-DPB1P04440 RAD23BP2-201ENST00000416003 1207 ntBASIC2.65□□□□□ -1.99
HLA-DPB1P04440 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DPB1P04440 AC079780.1-201ENST00000428259 207 ntBASIC2.65□□□□□ -1.99
HLA-DPB1P04440 AC092393.1-201ENST00000439625 742 ntBASIC2.65□□□□□ -1.99
HLA-DPB1P04440 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DPB1P04440 RPL39P40-201ENST00000445481 146 ntBASIC2.65□□□□□ -1.99
HLA-DPB1P04440 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DPB1P04440 RPL5P24-201ENST00000463742 885 ntBASIC2.65□□□□□ -1.99
HLA-DPB1P04440 RPL7P5-201ENST00000471472 736 ntBASIC2.65□□□□□ -1.99
HLA-DPB1P04440 RPS29P2-201ENST00000479278 136 ntBASIC2.65□□□□□ -1.99
HLA-DPB1P04440 RN7SL499P-201ENST00000481141 276 ntBASIC2.65□□□□□ -1.99
HLA-DPB1P04440 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DPB1P04440 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DPB1P04440 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.65□□□□□ -1.99
HLA-DPB1P04440 DEFB130C-202ENST00000530001 230 ntBASIC2.65□□□□□ -1.99
HLA-DPB1P04440 AP000857.1-201ENST00000532151 543 ntBASIC2.65□□□□□ -1.99
HLA-DPB1P04440 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DPB1P04440 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DPB1P04440 AC126177.3-201ENST00000551839 688 ntBASIC2.65□□□□□ -1.99
HLA-DPB1P04440 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DPB1P04440 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DPB1P04440 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.65□□□□□ -1.99
HLA-DPB1P04440 AC012669.1-201ENST00000603209 283 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms