Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.31□□□□□ -1.88
MBD3O95983 AC084824.1-201ENST00000550917 1005 ntBASIC3.31□□□□□ -1.88
MBD3O95983 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.31□□□□□ -1.88
MBD3O95983 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
MBD3O95983 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.31□□□□□ -1.88
MBD3O95983 AC087481.2-201ENST00000565492 330 ntBASIC3.31□□□□□ -1.88
MBD3O95983 MIR3160-1-201ENST00000577972 85 ntBASIC3.31□□□□□ -1.88
MBD3O95983 MIR4697-201ENST00000582977 78 ntBASIC3.31□□□□□ -1.88
MBD3O95983 AC006130.2-201ENST00000586202 326 ntBASIC3.31□□□□□ -1.88
MBD3O95983 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.31□□□□□ -1.88
MBD3O95983 DNAJC19P3-201ENST00000594491 331 ntBASIC3.31□□□□□ -1.88
MBD3O95983 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.31□□□□□ -1.88
MBD3O95983 AL109653.1-201ENST00000603091 248 ntBASIC3.31□□□□□ -1.88
MBD3O95983 XIAPP1-201ENST00000603162 600 ntBASIC3.31□□□□□ -1.88
MBD3O95983 AC093673.2-201ENST00000609674 331 ntBASIC3.31□□□□□ -1.88
MBD3O95983 RNU6-1192P-201ENST00000612197 107 ntBASIC3.31□□□□□ -1.88
MBD3O95983 RNU6-489P-201ENST00000618289 107 ntBASIC3.31□□□□□ -1.88
MBD3O95983 CYP3A51P-201ENST00000633513 256 ntBASIC3.31□□□□□ -1.88
MBD3O95983 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
MBD3O95983 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
MBD3O95983 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.3□□□□□ -1.88
MBD3O95983 AL136520.1-201ENST00000600311 1322 ntBASIC3.3□□□□□ -1.88
MBD3O95983 RNU6-707P-201ENST00000364647 95 ntBASIC3.3□□□□□ -1.88
MBD3O95983 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
MBD3O95983 SNORA26.7-201ENST00000391288 122 ntBASIC3.3□□□□□ -1.88
MBD3O95983 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.3□□□□□ -1.88
MBD3O95983 BTF3P8-201ENST00000414577 526 ntBASIC3.3□□□□□ -1.88
MBD3O95983 LUZP4P1-201ENST00000415420 344 ntBASIC3.3□□□□□ -1.88
MBD3O95983 AC245052.5-201ENST00000416320 649 ntBASIC3.3□□□□□ -1.88
MBD3O95983 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
MBD3O95983 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.3□□□□□ -1.88
MBD3O95983 DUTP6-201ENST00000425573 462 ntBASIC3.3□□□□□ -1.88
MBD3O95983 DPRXP1-201ENST00000426312 460 ntBASIC3.3□□□□□ -1.88
MBD3O95983 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.3□□□□□ -1.88
MBD3O95983 RPL21P2-201ENST00000440049 481 ntBASIC3.3□□□□□ -1.88
MBD3O95983 Z75741.1-201ENST00000446793 314 ntBASIC3.3□□□□□ -1.88
MBD3O95983 AL133547.1-201ENST00000448546 220 ntBASIC3.3□□□□□ -1.88
MBD3O95983 HMGN1P5-201ENST00000448591 263 ntBASIC3.3□□□□□ -1.88
MBD3O95983 MTND2P19-201ENST00000449129 1012 ntBASIC3.3□□□□□ -1.88
MBD3O95983 AC104308.1-201ENST00000454621 333 ntBASIC3.3□□□□□ -1.88
MBD3O95983 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
MBD3O95983 PNPLA4P1-201ENST00000458328 305 ntBASIC3.3□□□□□ -1.88
MBD3O95983 snoU13.4-201ENST00000458916 104 ntBASIC3.3□□□□□ -1.88
MBD3O95983 AC013828.1-201ENST00000481845 158 ntBASIC3.3□□□□□ -1.88
MBD3O95983 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.3□□□□□ -1.88
MBD3O95983 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.3□□□□□ -1.88
MBD3O95983 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.3□□□□□ -1.88
MBD3O95983 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.3□□□□□ -1.88
MBD3O95983 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.3□□□□□ -1.88
MBD3O95983 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.3□□□□□ -1.88
MBD3O95983 AC090502.2-201ENST00000549267 280 ntBASIC3.3□□□□□ -1.88
MBD3O95983 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.3□□□□□ -1.88
MBD3O95983 AC122134.1-202ENST00000569111 1201 ntBASIC3.3□□□□□ -1.88
MBD3O95983 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.3□□□□□ -1.88
MBD3O95983 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.3□□□□□ -1.88
MBD3O95983 AC015871.2-201ENST00000603605 948 ntBASIC3.3□□□□□ -1.88
MBD3O95983 AC124312.4-201ENST00000605533 310 ntBASIC3.3□□□□□ -1.88
MBD3O95983 AC055876.5-201ENST00000605667 259 ntBASIC3.3□□□□□ -1.88
MBD3O95983 AC010975.3-201ENST00000618727 978 ntBASIC3.3□□□□□ -1.88
MBD3O95983 AL360181.4-201ENST00000621752 134 ntBASIC3.3□□□□□ -1.88
MBD3O95983 MIR6810-201ENST00000622701 70 ntBASIC3.3□□□□□ -1.88
MBD3O95983 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.3□□□□□ -1.88
MBD3O95983 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.3□□□□□ -1.88
MBD3O95983 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
MBD3O95983 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
MBD3O95983 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.3□□□□□ -1.88
MBD3O95983 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.29□□□□□ -1.88
MBD3O95983 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
MBD3O95983 RN7SKP227-201ENST00000364445 330 ntBASIC3.29□□□□□ -1.88
MBD3O95983 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.29□□□□□ -1.88
MBD3O95983 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
MBD3O95983 AL603865.2-201ENST00000401679 213 ntBASIC3.29□□□□□ -1.88
MBD3O95983 RNU6-712P-201ENST00000410558 100 ntBASIC3.29□□□□□ -1.88
MBD3O95983 AC069282.1-201ENST00000411911 526 ntBASIC3.29□□□□□ -1.88
MBD3O95983 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.29□□□□□ -1.88
MBD3O95983 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.29□□□□□ -1.88
MBD3O95983 HMGN2P20-201ENST00000437531 273 ntBASIC3.29□□□□□ -1.88
MBD3O95983 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.29□□□□□ -1.88
MBD3O95983 AC008571.1-201ENST00000467232 300 ntBASIC3.29□□□□□ -1.88
MBD3O95983 AC103987.1-201ENST00000473394 348 ntBASIC3.29□□□□□ -1.88
MBD3O95983 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.29□□□□□ -1.88
MBD3O95983 AC069306.1-201ENST00000507006 843 ntBASIC3.29□□□□□ -1.88
MBD3O95983 AC004062.1-201ENST00000509926 645 ntBASIC3.29□□□□□ -1.88
MBD3O95983 MTND4LP31-201ENST00000514859 294 ntBASIC3.29□□□□□ -1.88
MBD3O95983 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.29□□□□□ -1.88
MBD3O95983 AL157394.1-201ENST00000562983 1224 ntBASIC3.29□□□□□ -1.88
MBD3O95983 AC104072.1-201ENST00000568817 668 ntBASIC3.29□□□□□ -1.88
MBD3O95983 MTCO3P24-201ENST00000572729 782 ntBASIC3.29□□□□□ -1.88
MBD3O95983 AC090079.2-201ENST00000575289 768 ntBASIC3.29□□□□□ -1.88
MBD3O95983 MIR4474-201ENST00000579189 78 ntBASIC3.29□□□□□ -1.88
MBD3O95983 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.29□□□□□ -1.88
MBD3O95983 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.29□□□□□ -1.88
MBD3O95983 AL035411.2-201ENST00000604022 421 ntBASIC3.29□□□□□ -1.88
MBD3O95983 AC010738.1-201ENST00000604970 987 ntBASIC3.29□□□□□ -1.88
MBD3O95983 AC092354.2-201ENST00000607786 514 ntBASIC3.29□□□□□ -1.88
MBD3O95983 AL359198.2-201ENST00000611836 194 ntBASIC3.29□□□□□ -1.88
MBD3O95983 AC068724.3-201ENST00000625906 87 ntBASIC3.29□□□□□ -1.88
MBD3O95983 MTCO1P23-201ENST00000415223 1526 ntBASIC3.29□□□□□ -1.88
MBD3O95983 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.29□□□□□ -1.88
MBD3O95983 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms