Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN1O95832 MTCO2P18-201ENST00000457151 658 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN1O95832 AC026410.2-201ENST00000460281 156 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 AC008155.2-201ENST00000464337 397 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 RN7SL807P-201ENST00000470923 297 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN1O95832 AC012170.1-201ENST00000495139 359 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN1O95832 RNF138P1-201ENST00000502765 546 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN1O95832 AC117532.1-201ENST00000514638 323 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 MIR2114-201ENST00000516645 80 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 HSPA8P13-201ENST00000523715 472 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 AC239860.2-201ENST00000525886 270 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN1O95832 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN1O95832 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN1O95832 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.38□□□□□ -1.87
CLDN1O95832 AC008127.2-201ENST00000549925 1075 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN1O95832 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN1O95832 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN1O95832 LARP7P2-201ENST00000575306 125 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN1O95832 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN1O95832 AC020914.4-201ENST00000597690 277 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
CLDN1O95832 AC091931.1-201ENST00000623488 728 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 AC119674.1-207ENST00000641355 633 ntBASIC3.38□□□□□ -1.87
CLDN1O95832 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN1O95832 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN1O95832 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN1O95832 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN1O95832 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN1O95832 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN1O95832 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN1O95832 AC010733.2-201ENST00000589496 5702 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN1O95832 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN1O95832 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN1O95832 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN1O95832 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CLDN1O95832 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CLDN1O95832 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN1O95832 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CLDN1O95832 AC007685.1-201ENST00000329806 452 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN1O95832 RNU4-24P-201ENST00000364565 139 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 Y_RNA.318-201ENST00000365131 97 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 RNA5SP88-201ENST00000365560 109 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 SNORA48.5-201ENST00000391143 135 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 AL024474.1-201ENST00000404655 591 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 AC069218.2-201ENST00000411665 344 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 ATP5A1P2-201ENST00000412323 255 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN1O95832 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN1O95832 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN1O95832 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN1O95832 AL831737.1-201ENST00000441288 271 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.37□□□□□ -1.87
CLDN1O95832 TAF9P1-201ENST00000445421 515 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 AC009961.3-201ENST00000449832 765 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN1O95832 MTCO3P16-201ENST00000454456 754 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 TAF9P2-201ENST00000454958 515 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 SNRPGP5-201ENST00000456003 220 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 RPL21P11-201ENST00000461458 483 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 MTND4LP3-201ENST00000468320 276 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 AC087385.1-201ENST00000475062 312 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN1O95832 AC080014.1-201ENST00000496877 1201 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
CLDN1O95832 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.37□□□□□ -1.87
CLDN1O95832 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN1O95832 AC087369.1-201ENST00000520775 996 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 AC022695.1-201ENST00000522089 237 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN1O95832 HIGD1AP10-201ENST00000527837 282 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN1O95832 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.37□□□□□ -1.87
CLDN1O95832 GNRHR2P1-201ENST00000555315 631 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 AP005205.1-201ENST00000563503 508 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 ACTR3BP3-201ENST00000565577 979 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 MIR4644-201ENST00000579929 84 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN1O95832 AC008507.1-201ENST00000587506 734 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 AC092354.1-201ENST00000606057 376 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 RNU6-88P-201ENST00000606801 100 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 AC011816.2-201ENST00000607089 556 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN1O95832 AC106028.5-201ENST00000610332 395 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 AC135507.2-201ENST00000612443 309 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 AC011939.3-201ENST00000613686 466 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN1O95832 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN1O95832 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN1O95832 AL773545.4-201ENST00000637262 310 ntBASIC3.37□□□□□ -1.87
CLDN1O95832 AL513478.4-201ENST00000641636 310 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms