Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC244517.1-201ENST00000606030 2086 ntBASIC3.08□□□□□ -1.92
POLR1AO95602 SNORA79B-201ENST00000410557 148 ntBASIC3.08□□□□□ -1.92
POLR1AO95602 AL359821.1-201ENST00000605519 182 ntBASIC3.08□□□□□ -1.92
POLR1AO95602 AC131902.3-201ENST00000611767 581 ntBASIC3.08□□□□□ -1.92
POLR1AO95602 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.08□□□□□ -1.92
POLR1AO95602 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.08□□□□□ -1.92
POLR1AO95602 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.08□□□□□ -1.92
POLR1AO95602 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.08□□□□□ -1.92
POLR1AO95602 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
POLR1AO95602 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
POLR1AO95602 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.08□□□□□ -1.92
POLR1AO95602 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
POLR1AO95602 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
POLR1AO95602 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
POLR1AO95602 RNU6-457P-201ENST00000363999 107 ntBASIC3.07□□□□□ -1.92
POLR1AO95602 MIR583-201ENST00000384846 75 ntBASIC3.07□□□□□ -1.92
POLR1AO95602 SNORA48.3-201ENST00000391081 134 ntBASIC3.07□□□□□ -1.92
POLR1AO95602 RNU6-1140P-201ENST00000410517 106 ntBASIC3.07□□□□□ -1.92
POLR1AO95602 HMGB3P15-201ENST00000507326 574 ntBASIC3.07□□□□□ -1.92
POLR1AO95602 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.07□□□□□ -1.92
POLR1AO95602 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.07□□□□□ -1.92
POLR1AO95602 AP003499.2-201ENST00000624100 483 ntBASIC3.07□□□□□ -1.92
POLR1AO95602 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
POLR1AO95602 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
POLR1AO95602 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
POLR1AO95602 Y_RNA.355-201ENST00000365462 98 ntBASIC3.07□□□□□ -1.92
POLR1AO95602 SNORA67.3-201ENST00000384366 140 ntBASIC3.07□□□□□ -1.92
POLR1AO95602 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.07□□□□□ -1.92
POLR1AO95602 AL353729.1-201ENST00000425044 720 ntBASIC3.07□□□□□ -1.92
POLR1AO95602 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.07□□□□□ -1.92
POLR1AO95602 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
POLR1AO95602 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.07□□□□□ -1.92
POLR1AO95602 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.07□□□□□ -1.92
POLR1AO95602 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.07□□□□□ -1.92
POLR1AO95602 AC013562.2-201ENST00000611632 603 ntBASIC3.07□□□□□ -1.92
POLR1AO95602 AC244517.12-201ENST00000623581 663 ntBASIC3.07□□□□□ -1.92
POLR1AO95602 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.06□□□□□ -1.92
POLR1AO95602 API5P2-201ENST00000397055 1498 ntBASIC3.06□□□□□ -1.92
POLR1AO95602 METTL21EP-201ENST00000298105 713 ntBASIC3.06□□□□□ -1.92
POLR1AO95602 OR4K11P-201ENST00000431829 904 ntBASIC3.06□□□□□ -1.92
POLR1AO95602 MTCYBP31-201ENST00000438855 1122 ntBASIC3.06□□□□□ -1.92
POLR1AO95602 CBWD4P-201ENST00000445695 655 ntBASIC3.06□□□□□ -1.92
POLR1AO95602 AL445669.2-201ENST00000454425 421 ntBASIC3.06□□□□□ -1.92
POLR1AO95602 AC073901.1-201ENST00000462471 408 ntBASIC3.06□□□□□ -1.92
POLR1AO95602 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.06□□□□□ -1.92
POLR1AO95602 RN7SKP96-201ENST00000516948 297 ntBASIC3.06□□□□□ -1.92
POLR1AO95602 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
POLR1AO95602 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.06□□□□□ -1.92
POLR1AO95602 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.06□□□□□ -1.92
POLR1AO95602 AC034268.2-201ENST00000571784 482 ntBASIC3.06□□□□□ -1.92
POLR1AO95602 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.06□□□□□ -1.92
POLR1AO95602 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.06□□□□□ -1.92
POLR1AO95602 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
POLR1AO95602 AL450326.2-201ENST00000421913 1962 ntBASIC3.06□□□□□ -1.92
POLR1AO95602 AC010329.2-201ENST00000595195 2737 ntBASIC3.06□□□□□ -1.92
POLR1AO95602 CDC27P2-201ENST00000425026 1922 ntBASIC3.05□□□□□ -1.92
POLR1AO95602 TAF9P1-201ENST00000445421 515 ntBASIC3.05□□□□□ -1.92
POLR1AO95602 TAF9P2-201ENST00000454958 515 ntBASIC3.05□□□□□ -1.92
POLR1AO95602 AC011611.5-201ENST00000552477 578 ntBASIC3.05□□□□□ -1.92
POLR1AO95602 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.05□□□□□ -1.92
POLR1AO95602 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.05□□□□□ -1.92
POLR1AO95602 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.05□□□□□ -1.92
POLR1AO95602 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.05□□□□□ -1.92
POLR1AO95602 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
POLR1AO95602 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
POLR1AO95602 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.05□□□□□ -1.92
POLR1AO95602 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.05□□□□□ -1.92
POLR1AO95602 NAMPTP2-201ENST00000505629 1115 ntBASIC3.05□□□□□ -1.92
POLR1AO95602 CCNHP1-201ENST00000513311 678 ntBASIC3.05□□□□□ -1.92
POLR1AO95602 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.05□□□□□ -1.92
POLR1AO95602 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.05□□□□□ -1.92
POLR1AO95602 ZNF720P1-201ENST00000562403 1939 ntBASIC3.04□□□□□ -1.92
POLR1AO95602 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.04□□□□□ -1.92
POLR1AO95602 RN7SKP226-201ENST00000364912 300 ntBASIC3.04□□□□□ -1.92
POLR1AO95602 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.04□□□□□ -1.92
POLR1AO95602 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.04□□□□□ -1.92
POLR1AO95602 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.04□□□□□ -1.92
POLR1AO95602 AC098799.2-201ENST00000509466 868 ntBASIC3.04□□□□□ -1.92
POLR1AO95602 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
POLR1AO95602 PRELID2P1-201ENST00000552837 301 ntBASIC3.04□□□□□ -1.92
POLR1AO95602 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
POLR1AO95602 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.04□□□□□ -1.92
POLR1AO95602 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
POLR1AO95602 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.03□□□□□ -1.92
POLR1AO95602 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
POLR1AO95602 SNORA25.9-201ENST00000365087 128 ntBASIC3.03□□□□□ -1.92
POLR1AO95602 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.03□□□□□ -1.92
POLR1AO95602 RPL7P46-201ENST00000425129 740 ntBASIC3.03□□□□□ -1.92
POLR1AO95602 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
POLR1AO95602 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.03□□□□□ -1.92
POLR1AO95602 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.03□□□□□ -1.92
POLR1AO95602 NDUFS5P3-201ENST00000450668 321 ntBASIC3.03□□□□□ -1.92
POLR1AO95602 AC233279.1-201ENST00000455300 423 ntBASIC3.03□□□□□ -1.92
POLR1AO95602 RPL7P5-201ENST00000471472 736 ntBASIC3.03□□□□□ -1.92
POLR1AO95602 AP000926.1-201ENST00000479573 241 ntBASIC3.03□□□□□ -1.92
POLR1AO95602 GZMAP1-201ENST00000503054 631 ntBASIC3.03□□□□□ -1.92
POLR1AO95602 AC108078.2-201ENST00000510750 236 ntBASIC3.03□□□□□ -1.92
POLR1AO95602 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.03□□□□□ -1.92
POLR1AO95602 AL391813.2-201ENST00000609113 322 ntBASIC3.03□□□□□ -1.92
POLR1AO95602 MIR6132-201ENST00000622083 109 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms