Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 RPL23AP74-201ENST00000437246 471 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 MTND6P18-201ENST00000439477 513 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 AL357520.1-201ENST00000441557 453 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 MTCO1P27-201ENST00000448269 226 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 MTND1P27-201ENST00000451117 902 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAPGEF3O95398 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAPGEF3O95398 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.54□□□□□ -1.52
RAPGEF3O95398 AC106872.3-201ENST00000495104 446 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.54□□□□□ -1.52
RAPGEF3O95398 AC104057.1-201ENST00000515547 497 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.54□□□□□ -1.52
RAPGEF3O95398 AP004247.1-201ENST00000531556 1289 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.54□□□□□ -1.52
RAPGEF3O95398 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.54□□□□□ -1.52
RAPGEF3O95398 OR6C73P-201ENST00000546432 358 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.54□□□□□ -1.52
RAPGEF3O95398 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC5.54□□□□□ -1.52
RAPGEF3O95398 MIR4504-201ENST00000577413 92 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5.54□□□□□ -1.52
RAPGEF3O95398 AL606834.2-201ENST00000602954 668 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 AC080013.4-201ENST00000607624 649 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.54□□□□□ -1.52
RAPGEF3O95398 U6.101-201ENST00000637707 76 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 AC092447.7-201ENST00000422212 1621 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAPGEF3O95398 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RAPGEF3O95398 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAPGEF3O95398 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.54□□□□□ -1.52
RAPGEF3O95398 ZNF807-201ENST00000328088 1707 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAPGEF3O95398 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RAPGEF3O95398 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RAPGEF3O95398 AC008079.2-201ENST00000623543 20396 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 TEX21P-201ENST00000447107 1476 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 AC027514.1-201ENST00000588561 1603 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
RAPGEF3O95398 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.53□□□□□ -1.52
RAPGEF3O95398 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RAPGEF3O95398 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RAPGEF3O95398 RNA5SP432-201ENST00000362480 116 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 RNA5SP126-201ENST00000365092 109 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RAPGEF3O95398 MTCYBP36-201ENST00000404146 440 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 MIR320C1-201ENST00000408566 88 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 AC008065.1-201ENST00000428525 348 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.53□□□□□ -1.52
RAPGEF3O95398 TPT1P7-201ENST00000458300 517 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 RNU7-136P-201ENST00000458819 69 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 AF213884.2-201ENST00000510417 903 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 RNU4ATAC17P-201ENST00000517272 120 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 AC104986.1-201ENST00000517978 436 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 AL139174.1-201ENST00000531489 886 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.53□□□□□ -1.52
RAPGEF3O95398 AC245505.1-201ENST00000556398 224 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.53□□□□□ -1.52
RAPGEF3O95398 AGGF1P8-201ENST00000562979 1000 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 MIR4472-2-201ENST00000582069 67 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 MIR4672-201ENST00000583126 81 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.53□□□□□ -1.52
RAPGEF3O95398 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.53□□□□□ -1.52
RAPGEF3O95398 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.53□□□□□ -1.52
RAPGEF3O95398 SLC25A36P1-201ENST00000590111 465 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.53□□□□□ -1.52
RAPGEF3O95398 AC091805.2-201ENST00000603848 235 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 PRELID3BP8-201ENST00000604148 295 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 AC138932.5-201ENST00000617759 563 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 AL773545.4-201ENST00000637262 310 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 AL513478.4-201ENST00000641636 310 ntBASIC5.53□□□□□ -1.52
RAPGEF3O95398 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RAPGEF3O95398 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.53□□□□□ -1.52
RAPGEF3O95398 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RAPGEF3O95398 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.53□□□□□ -1.52
RAPGEF3O95398 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RAPGEF3O95398 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAPGEF3O95398 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAPGEF3O95398 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.52□□□□□ -1.53
RAPGEF3O95398 SAGE4P-201ENST00000442271 3381 ntBASIC5.52□□□□□ -1.53
RAPGEF3O95398 AP002907.1-201ENST00000606361 1430 ntBASIC5.52□□□□□ -1.53
RAPGEF3O95398 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAPGEF3O95398 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAPGEF3O95398 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RAPGEF3O95398 UBE2V1P2-201ENST00000397758 440 ntBASIC5.52□□□□□ -1.53
RAPGEF3O95398 MIR1305-201ENST00000408300 86 ntBASIC5.52□□□□□ -1.53
RAPGEF3O95398 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.52□□□□□ -1.53
RAPGEF3O95398 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.52□□□□□ -1.53
RAPGEF3O95398 COTL1P1-201ENST00000422309 375 ntBASIC5.52□□□□□ -1.53
RAPGEF3O95398 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.52□□□□□ -1.53
RAPGEF3O95398 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.52□□□□□ -1.53
RAPGEF3O95398 AC105402.2-201ENST00000438503 358 ntBASIC5.52□□□□□ -1.53
RAPGEF3O95398 PAXBP1P1-201ENST00000449315 447 ntBASIC5.52□□□□□ -1.53
RAPGEF3O95398 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5.52□□□□□ -1.53
RAPGEF3O95398 AP001992.1-205ENST00000462248 379 ntBASIC5.52□□□□□ -1.53
RAPGEF3O95398 AC006517.1-201ENST00000480485 328 ntBASIC5.52□□□□□ -1.53
RAPGEF3O95398 AC093663.1-201ENST00000497190 394 ntBASIC5.52□□□□□ -1.53
RAPGEF3O95398 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.52□□□□□ -1.53
RAPGEF3O95398 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.52□□□□□ -1.53
RAPGEF3O95398 AC023141.12-201ENST00000512399 199 ntBASIC5.52□□□□□ -1.53
RAPGEF3O95398 Vault.1-201ENST00000516474 102 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms