Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
RTN3O95197 RNU6-777P-201ENST00000364265 104 ntBASIC4.03□□□□□ -1.76
RTN3O95197 RNA5SP88-201ENST00000365560 109 ntBASIC4.03□□□□□ -1.76
RTN3O95197 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
RTN3O95197 HMGN2P8-201ENST00000391458 268 ntBASIC4.03□□□□□ -1.76
RTN3O95197 PTMAP5-201ENST00000393073 333 ntBASIC4.03□□□□□ -1.76
RTN3O95197 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.03□□□□□ -1.76
RTN3O95197 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RTN3O95197 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RTN3O95197 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
RTN3O95197 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.03□□□□□ -1.76
RTN3O95197 AC092447.3-201ENST00000426027 686 ntBASIC4.03□□□□□ -1.76
RTN3O95197 AC006946.1-201ENST00000429106 328 ntBASIC4.03□□□□□ -1.76
RTN3O95197 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.03□□□□□ -1.76
RTN3O95197 UBE2FP3-201ENST00000436366 524 ntBASIC4.03□□□□□ -1.76
RTN3O95197 Z74696.2-201ENST00000436514 498 ntBASIC4.03□□□□□ -1.76
RTN3O95197 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.03□□□□□ -1.76
RTN3O95197 MTND5P2-201ENST00000442927 1142 ntBASIC4.03□□□□□ -1.76
RTN3O95197 AL133547.1-201ENST00000448546 220 ntBASIC4.03□□□□□ -1.76
RTN3O95197 ATG12P2-201ENST00000456830 416 ntBASIC4.03□□□□□ -1.76
RTN3O95197 AC004801.2-202ENST00000463559 283 ntBASIC4.03□□□□□ -1.76
RTN3O95197 TMED11P-201ENST00000479478 690 ntBASIC4.03□□□□□ -1.76
RTN3O95197 AP001086.1-201ENST00000494882 321 ntBASIC4.03□□□□□ -1.76
RTN3O95197 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.03□□□□□ -1.76
RTN3O95197 RNU6-714P-201ENST00000516963 103 ntBASIC4.03□□□□□ -1.76
RTN3O95197 PAICSP4-201ENST00000517543 1253 ntBASIC4.03□□□□□ -1.76
RTN3O95197 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.03□□□□□ -1.76
RTN3O95197 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RTN3O95197 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RTN3O95197 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.03□□□□□ -1.76
RTN3O95197 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.03□□□□□ -1.76
RTN3O95197 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.03□□□□□ -1.76
RTN3O95197 VN1R90P-201ENST00000595717 726 ntBASIC4.03□□□□□ -1.76
RTN3O95197 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.03□□□□□ -1.76
RTN3O95197 AL353748.2-201ENST00000622148 471 ntBASIC4.03□□□□□ -1.76
RTN3O95197 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.03□□□□□ -1.76
RTN3O95197 AL356596.1-201ENST00000624230 379 ntBASIC4.03□□□□□ -1.76
RTN3O95197 AC009039.2-201ENST00000624524 529 ntBASIC4.03□□□□□ -1.76
RTN3O95197 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RTN3O95197 RIOK3P1-201ENST00000418778 1528 ntBASIC4.03□□□□□ -1.76
RTN3O95197 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RTN3O95197 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.03□□□□□ -1.77
RTN3O95197 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.02□□□□□ -1.77
RTN3O95197 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.02□□□□□ -1.77
RTN3O95197 RNA5SP171-201ENST00000391071 115 ntBASIC4.02□□□□□ -1.77
RTN3O95197 PTMAP2-201ENST00000397627 327 ntBASIC4.02□□□□□ -1.77
RTN3O95197 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.02□□□□□ -1.77
RTN3O95197 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.02□□□□□ -1.77
RTN3O95197 BEND7P1-201ENST00000422058 457 ntBASIC4.02□□□□□ -1.77
RTN3O95197 AL139247.1-201ENST00000422768 325 ntBASIC4.02□□□□□ -1.77
RTN3O95197 DUTP6-201ENST00000425573 462 ntBASIC4.02□□□□□ -1.77
RTN3O95197 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.02□□□□□ -1.77
RTN3O95197 AC018644.1-201ENST00000429934 551 ntBASIC4.02□□□□□ -1.77
RTN3O95197 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.02□□□□□ -1.77
RTN3O95197 AL500522.2-201ENST00000448562 343 ntBASIC4.02□□□□□ -1.77
RTN3O95197 RPS17P13-201ENST00000448974 407 ntBASIC4.02□□□□□ -1.77
RTN3O95197 NANOGP10-201ENST00000453325 895 ntBASIC4.02□□□□□ -1.77
RTN3O95197 ARPC3P2-201ENST00000457786 533 ntBASIC4.02□□□□□ -1.77
RTN3O95197 snoU13.22-201ENST00000459428 104 ntBASIC4.02□□□□□ -1.77
RTN3O95197 RPL9P32-201ENST00000464118 620 ntBASIC4.02□□□□□ -1.77
RTN3O95197 AC017015.1-201ENST00000477387 286 ntBASIC4.02□□□□□ -1.77
RTN3O95197 AP002812.1-201ENST00000495378 474 ntBASIC4.02□□□□□ -1.77
RTN3O95197 MLLT10P2-201ENST00000506434 249 ntBASIC4.02□□□□□ -1.77
RTN3O95197 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.02□□□□□ -1.77
RTN3O95197 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.02□□□□□ -1.77
RTN3O95197 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.02□□□□□ -1.77
RTN3O95197 RNU6-678P-201ENST00000516832 109 ntBASIC4.02□□□□□ -1.77
RTN3O95197 SCARNA14-201ENST00000516903 136 ntBASIC4.02□□□□□ -1.77
RTN3O95197 AC022695.1-201ENST00000522089 237 ntBASIC4.02□□□□□ -1.77
RTN3O95197 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.02□□□□□ -1.77
RTN3O95197 MTATP6P15-201ENST00000527233 835 ntBASIC4.02□□□□□ -1.77
RTN3O95197 DUXAP5-201ENST00000529668 529 ntBASIC4.02□□□□□ -1.77
RTN3O95197 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RTN3O95197 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.02□□□□□ -1.77
RTN3O95197 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.02□□□□□ -1.77
RTN3O95197 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.02□□□□□ -1.77
RTN3O95197 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.02□□□□□ -1.77
RTN3O95197 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.02□□□□□ -1.77
RTN3O95197 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.02□□□□□ -1.77
RTN3O95197 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.02□□□□□ -1.77
RTN3O95197 AC021171.1-201ENST00000603137 706 ntBASIC4.02□□□□□ -1.77
RTN3O95197 AL353778.1-201ENST00000603149 408 ntBASIC4.02□□□□□ -1.77
RTN3O95197 AC006254.3-201ENST00000603353 884 ntBASIC4.02□□□□□ -1.77
RTN3O95197 ELOCP35-201ENST00000604289 336 ntBASIC4.02□□□□□ -1.77
RTN3O95197 AC018714.1-201ENST00000605028 208 ntBASIC4.02□□□□□ -1.77
RTN3O95197 AC072039.2-201ENST00000608883 439 ntBASIC4.02□□□□□ -1.77
RTN3O95197 TUG1_1.1-201ENST00000610654 145 ntBASIC4.02□□□□□ -1.77
RTN3O95197 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.02□□□□□ -1.77
RTN3O95197 AC008147.4-201ENST00000617570 1204 ntBASIC4.02□□□□□ -1.77
RTN3O95197 AC091304.6-201ENST00000619761 202 ntBASIC4.02□□□□□ -1.77
RTN3O95197 AL031667.3-201ENST00000620124 655 ntBASIC4.02□□□□□ -1.77
RTN3O95197 AL590240.3-201ENST00000621416 943 ntBASIC4.02□□□□□ -1.77
RTN3O95197 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RTN3O95197 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.02□□□□□ -1.77
RTN3O95197 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.02□□□□□ -1.77
RTN3O95197 ZNF826P-207ENST00000622273 1910 ntBASIC4.01□□□□□ -1.77
RTN3O95197 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RTN3O95197 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
RTN3O95197 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RTN3O95197 UBE3AP2-201ENST00000429033 2259 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms