Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.41□□□□□ -1.54
VAMP4O75379 MTND1P37-201ENST00000636562 264 ntBASIC5.41□□□□□ -1.54
VAMP4O75379 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VAMP4O75379 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VAMP4O75379 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.41□□□□□ -1.54
VAMP4O75379 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VAMP4O75379 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.41□□□□□ -1.54
VAMP4O75379 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
VAMP4O75379 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.41□□□□□ -1.54
VAMP4O75379 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VAMP4O75379 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VAMP4O75379 AP000542.2-201ENST00000623199 6179 ntBASIC5.41□□□□□ -1.54
VAMP4O75379 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.4□□□□□ -1.54
VAMP4O75379 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VAMP4O75379 RNU6-1322P-201ENST00000364309 107 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 RNU6-343P-201ENST00000364709 104 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 Y_RNA.279-201ENST00000364763 95 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 RNU6-744P-201ENST00000365557 107 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 XGY1-201ENST00000381172 446 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 RNU6-1316P-201ENST00000384242 108 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.4□□□□□ -1.54
VAMP4O75379 COX6CP15-201ENST00000426313 211 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 AC104850.1-201ENST00000435940 476 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.4□□□□□ -1.54
VAMP4O75379 AL136380.1-201ENST00000447970 162 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 IFNWP4-201ENST00000453148 294 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.4□□□□□ -1.54
VAMP4O75379 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.4□□□□□ -1.54
VAMP4O75379 RNA5SP246-201ENST00000458909 119 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.4□□□□□ -1.54
VAMP4O75379 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VAMP4O75379 RN7SL860P-201ENST00000473738 223 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 RPS29P19-201ENST00000479709 171 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.4□□□□□ -1.54
VAMP4O75379 RPS27AP13-201ENST00000498403 237 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 AC114786.4-201ENST00000508771 728 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 LRRC34P2-201ENST00000514850 553 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 Vault.3-201ENST00000516676 95 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 AC022616.6-201ENST00000520479 119 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.4□□□□□ -1.54
VAMP4O75379 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.4□□□□□ -1.54
VAMP4O75379 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.4□□□□□ -1.54
VAMP4O75379 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.4□□□□□ -1.54
VAMP4O75379 AL353997.4-201ENST00000586196 166 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.4□□□□□ -1.54
VAMP4O75379 BBIP1P1-201ENST00000602999 279 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 AL162413.1-201ENST00000603198 110 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 BX664608.1-201ENST00000610519 487 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 AC009159.1-201ENST00000618386 642 ntBASIC5.4□□□□□ -1.54
VAMP4O75379 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.4□□□□□ -1.54
VAMP4O75379 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.4□□□□□ -1.54
VAMP4O75379 FER-210ENST00000628534 558 ntTSL 5 BASIC5.4□□□□□ -1.54
VAMP4O75379 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VAMP4O75379 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VAMP4O75379 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VAMP4O75379 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
VAMP4O75379 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.4□□□□□ -1.55
VAMP4O75379 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.4□□□□□ -1.55
VAMP4O75379 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 AC024560.2-201ENST00000507981 1497 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
VAMP4O75379 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
VAMP4O75379 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.39□□□□□ -1.55
VAMP4O75379 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.39□□□□□ -1.55
VAMP4O75379 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VAMP4O75379 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VAMP4O75379 OR52B1P-201ENST00000316506 909 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 SNORD56.2-201ENST00000363242 71 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 RNU6-282P-201ENST00000365357 103 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
VAMP4O75379 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 AC016769.3-201ENST00000396562 315 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 RNU6-908P-201ENST00000410160 94 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 AC127391.1-201ENST00000411737 98 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 JKAMPP1-201ENST00000413804 919 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.39□□□□□ -1.55
VAMP4O75379 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.39□□□□□ -1.55
VAMP4O75379 OR51AB1P-201ENST00000429046 620 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.39□□□□□ -1.55
VAMP4O75379 HMGB3P12-201ENST00000438745 556 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 PMCHL2-203ENST00000457791 237 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 RPL7P15-201ENST00000461190 712 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 AC006511.1-201ENST00000470614 315 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 RPL36AP51-201ENST00000487216 318 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 AP001025.2-201ENST00000490908 477 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.39□□□□□ -1.55
VAMP4O75379 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.39□□□□□ -1.55
VAMP4O75379 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.39□□□□□ -1.55
VAMP4O75379 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
VAMP4O75379 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.39□□□□□ -1.55
VAMP4O75379 AL138976.2-201ENST00000563989 694 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 AC136624.4-201ENST00000573044 370 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 AC099489.2-201ENST00000574976 260 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 AC233702.9-201ENST00000581528 203 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.39□□□□□ -1.55
VAMP4O75379 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.39□□□□□ -1.55
VAMP4O75379 MIR98-201ENST00000606724 119 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 AL133173.2-201ENST00000614270 90 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 MIR7151-201ENST00000617477 60 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 AC010149.2-201ENST00000637608 315 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms