Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 RNU6-628P-201ENST00000410675 107 ntBASIC3.73□□□□□ -1.81
LDB3O75112 RNU6-248P-201ENST00000410720 107 ntBASIC3.73□□□□□ -1.81
LDB3O75112 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.73□□□□□ -1.81
LDB3O75112 NANOGP6-201ENST00000429190 847 ntBASIC3.73□□□□□ -1.81
LDB3O75112 RPL23AP74-201ENST00000437246 471 ntBASIC3.73□□□□□ -1.81
LDB3O75112 SNRPEP7-201ENST00000438350 220 ntBASIC3.73□□□□□ -1.81
LDB3O75112 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.73□□□□□ -1.81
LDB3O75112 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.73□□□□□ -1.81
LDB3O75112 ARPC3P5-201ENST00000448802 534 ntBASIC3.73□□□□□ -1.81
LDB3O75112 AC104073.1-201ENST00000451988 151 ntBASIC3.73□□□□□ -1.81
LDB3O75112 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.73□□□□□ -1.81
LDB3O75112 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LDB3O75112 AP000797.1-201ENST00000478870 387 ntBASIC3.73□□□□□ -1.81
LDB3O75112 TMED11P-201ENST00000479478 690 ntBASIC3.73□□□□□ -1.81
LDB3O75112 AC068587.1-201ENST00000483613 781 ntBASIC3.73□□□□□ -1.81
LDB3O75112 FAM172BP-201ENST00000487497 1089 ntBASIC3.73□□□□□ -1.81
LDB3O75112 RPS26P15-201ENST00000488067 348 ntBASIC3.73□□□□□ -1.81
LDB3O75112 RPL9P6-201ENST00000492764 598 ntBASIC3.73□□□□□ -1.81
LDB3O75112 AC012170.1-201ENST00000495139 359 ntBASIC3.73□□□□□ -1.81
LDB3O75112 RPL31P61-201ENST00000496160 376 ntBASIC3.73□□□□□ -1.81
LDB3O75112 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.73□□□□□ -1.81
LDB3O75112 AC109464.2-201ENST00000510242 943 ntBASIC3.73□□□□□ -1.81
LDB3O75112 FTH1P21-201ENST00000512179 511 ntBASIC3.73□□□□□ -1.81
LDB3O75112 HSPA8P13-201ENST00000523715 472 ntBASIC3.73□□□□□ -1.81
LDB3O75112 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.73□□□□□ -1.81
LDB3O75112 OR4A45P-201ENST00000529954 901 ntBASIC3.73□□□□□ -1.81
LDB3O75112 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.73□□□□□ -1.81
LDB3O75112 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.73□□□□□ -1.81
LDB3O75112 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.73□□□□□ -1.81
LDB3O75112 AL133457.1-201ENST00000564251 987 ntBASIC3.73□□□□□ -1.81
LDB3O75112 LARP7P2-201ENST00000575306 125 ntBASIC3.73□□□□□ -1.81
LDB3O75112 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.73□□□□□ -1.81
LDB3O75112 AP001004.1-201ENST00000582468 324 ntBASIC3.73□□□□□ -1.81
LDB3O75112 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.73□□□□□ -1.81
LDB3O75112 AC005771.1-201ENST00000585581 349 ntBASIC3.73□□□□□ -1.81
LDB3O75112 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.73□□□□□ -1.81
LDB3O75112 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.73□□□□□ -1.81
LDB3O75112 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.73□□□□□ -1.81
LDB3O75112 AL109618.2-201ENST00000605527 211 ntBASIC3.73□□□□□ -1.81
LDB3O75112 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.73□□□□□ -1.81
LDB3O75112 AC017083.3-201ENST00000609955 700 ntBASIC3.73□□□□□ -1.81
LDB3O75112 AC090970.3-201ENST00000612566 866 ntBASIC3.73□□□□□ -1.81
LDB3O75112 AL731566.2-201ENST00000618971 317 ntBASIC3.73□□□□□ -1.81
LDB3O75112 AC068831.8-201ENST00000620171 435 ntBASIC3.73□□□□□ -1.81
LDB3O75112 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.73□□□□□ -1.81
LDB3O75112 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
LDB3O75112 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.73□□□□□ -1.81
LDB3O75112 PABPC1P7-201ENST00000413177 1513 ntBASIC3.73□□□□□ -1.81
LDB3O75112 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LDB3O75112 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LDB3O75112 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LDB3O75112 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
LDB3O75112 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
LDB3O75112 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.73□□□□□ -1.81
LDB3O75112 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
LDB3O75112 AC026951.1-201ENST00000559530 2459 ntBASIC3.72□□□□□ -1.81
LDB3O75112 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.72□□□□□ -1.81
LDB3O75112 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
LDB3O75112 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
LDB3O75112 ELF2P3-201ENST00000445099 1506 ntBASIC3.72□□□□□ -1.81
LDB3O75112 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LDB3O75112 Y_RNA.97-201ENST00000363094 102 ntBASIC3.72□□□□□ -1.81
LDB3O75112 RNU5F-7P-201ENST00000363696 115 ntBASIC3.72□□□□□ -1.81
LDB3O75112 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
LDB3O75112 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.72□□□□□ -1.81
LDB3O75112 RPL7AP73-201ENST00000413490 353 ntBASIC3.72□□□□□ -1.81
LDB3O75112 JKAMPP1-201ENST00000413804 919 ntBASIC3.72□□□□□ -1.81
LDB3O75112 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.72□□□□□ -1.81
LDB3O75112 AC245052.5-201ENST00000416320 649 ntBASIC3.72□□□□□ -1.81
LDB3O75112 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.72□□□□□ -1.81
LDB3O75112 AC004552.1-201ENST00000419089 348 ntBASIC3.72□□□□□ -1.81
LDB3O75112 RPL7P30-201ENST00000420888 709 ntBASIC3.72□□□□□ -1.81
LDB3O75112 OFD1P18Y-201ENST00000420889 959 ntBASIC3.72□□□□□ -1.81
LDB3O75112 AL512649.1-201ENST00000428997 581 ntBASIC3.72□□□□□ -1.81
LDB3O75112 AC011742.1-201ENST00000431448 434 ntBASIC3.72□□□□□ -1.81
LDB3O75112 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
LDB3O75112 AL831737.1-201ENST00000441288 271 ntBASIC3.72□□□□□ -1.81
LDB3O75112 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.72□□□□□ -1.81
LDB3O75112 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.72□□□□□ -1.81
LDB3O75112 RPL21P89-201ENST00000444021 467 ntBASIC3.72□□□□□ -1.81
LDB3O75112 AL590399.6-201ENST00000446396 307 ntBASIC3.72□□□□□ -1.81
LDB3O75112 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.72□□□□□ -1.81
LDB3O75112 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.72□□□□□ -1.81
LDB3O75112 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.72□□□□□ -1.81
LDB3O75112 RPS26P3-201ENST00000470205 348 ntBASIC3.72□□□□□ -1.81
LDB3O75112 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LDB3O75112 PPIAP15-201ENST00000479662 484 ntBASIC3.72□□□□□ -1.81
LDB3O75112 AC090543.2-201ENST00000483963 348 ntBASIC3.72□□□□□ -1.81
LDB3O75112 AC004057.1-201ENST00000485827 348 ntBASIC3.72□□□□□ -1.81
LDB3O75112 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.72□□□□□ -1.81
LDB3O75112 AL358832.1-201ENST00000497800 389 ntBASIC3.72□□□□□ -1.81
LDB3O75112 TMEM251P1-201ENST00000503717 318 ntBASIC3.72□□□□□ -1.81
LDB3O75112 FAM92A1P2-202ENST00000504766 877 ntBASIC3.72□□□□□ -1.81
LDB3O75112 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.72□□□□□ -1.81
LDB3O75112 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.72□□□□□ -1.81
LDB3O75112 MTND5P4-201ENST00000514978 288 ntBASIC3.72□□□□□ -1.81
LDB3O75112 RN7SKP21-201ENST00000516503 220 ntBASIC3.72□□□□□ -1.81
LDB3O75112 RNU4-60P-201ENST00000517239 135 ntBASIC3.72□□□□□ -1.81
LDB3O75112 OR4R3P-201ENST00000525084 838 ntBASIC3.72□□□□□ -1.81
LDB3O75112 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms