Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP2AO43633 AC055876.1-202ENST00000567053 138 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP2AO43633 AC022069.1-201ENST00000582910 658 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 AC231759.1-201ENST00000616455 597 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 AL163152.1-201ENST00000642001 374 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHMP2AO43633 MTND5P11-201ENST00000511037 1812 ntBASIC3.07□□□□□ -1.92
CHMP2AO43633 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
CHMP2AO43633 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CHMP2AO43633 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
CHMP2AO43633 MIR26A1-201ENST00000362205 77 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 Y_RNA.510-201ENST00000384511 114 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 AL360182.1-201ENST00000397433 468 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.06□□□□□ -1.92
CHMP2AO43633 MTND4LP20-201ENST00000402379 270 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 UBE2V1P11-201ENST00000411559 285 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 SSXP9-201ENST00000417503 292 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 ARL5AP4-201ENST00000430731 512 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.06□□□□□ -1.92
CHMP2AO43633 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.06□□□□□ -1.92
CHMP2AO43633 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
CHMP2AO43633 AC096751.1-202ENST00000502691 1067 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 AC117522.3-201ENST00000507974 584 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CHMP2AO43633 MTCYBP37-201ENST00000510642 1133 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 AC103833.1-201ENST00000517442 172 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHMP2AO43633 ERHP1-201ENST00000523006 310 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 AC111188.2-201ENST00000529697 1387 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 SNRPGP16-201ENST00000533275 226 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.06□□□□□ -1.92
CHMP2AO43633 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.06□□□□□ -1.92
CHMP2AO43633 AC233266.2-201ENST00000567067 528 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 AC073387.2-201ENST00000604797 784 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 BNIP3P4-201ENST00000604946 565 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 OR2AS2P-201ENST00000606902 342 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 AL355810.1-201ENST00000614629 552 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 AL354696.1-201ENST00000614652 497 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 AC002076.2-201ENST00000617362 122 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 AC073968.1-201ENST00000618594 637 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 MIR6852-201ENST00000621699 66 ntBASIC3.06□□□□□ -1.92
CHMP2AO43633 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CHMP2AO43633 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CHMP2AO43633 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CHMP2AO43633 AL136520.1-201ENST00000600311 1322 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CHMP2AO43633 RNU6-921P-201ENST00000384361 107 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 RNU6-883P-201ENST00000384597 107 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 AL356057.3-201ENST00000402607 340 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 RNU6-712P-201ENST00000410558 100 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 RNA5SP38-201ENST00000410750 119 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 RNA5SP21-201ENST00000410917 96 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.05□□□□□ -1.92
CHMP2AO43633 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.05□□□□□ -1.92
CHMP2AO43633 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.05□□□□□ -1.92
CHMP2AO43633 PTP4A1P3-201ENST00000433661 420 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 AC112220.1-201ENST00000434628 355 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 SNRPEP4-201ENST00000435815 279 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 AL590762.3-201ENST00000436372 640 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 COX6CP2-201ENST00000444980 225 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 AL500527.1-201ENST00000448532 255 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 AL034418.1-201ENST00000448675 860 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 RNA5SP310-201ENST00000459084 116 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.05□□□□□ -1.92
CHMP2AO43633 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.05□□□□□ -1.92
CHMP2AO43633 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.05□□□□□ -1.92
CHMP2AO43633 SNORA31.26-201ENST00000517250 137 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.05□□□□□ -1.92
CHMP2AO43633 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.05□□□□□ -1.92
CHMP2AO43633 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.05□□□□□ -1.92
CHMP2AO43633 AL133271.1-201ENST00000538229 291 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.05□□□□□ -1.92
CHMP2AO43633 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.05□□□□□ -1.92
CHMP2AO43633 AL731537.2-201ENST00000561565 951 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.05□□□□□ -1.92
CHMP2AO43633 OR4H6P-202ENST00000603819 340 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 AC112503.2-201ENST00000609005 552 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 VIS1.1-201ENST00000610517 203 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 AL163051.2-201ENST00000618976 735 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 Z99129.2-201ENST00000619967 314 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 AL360181.4-201ENST00000621752 134 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 AC098679.5-201ENST00000624394 571 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.05□□□□□ -1.92
CHMP2AO43633 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.05□□□□□ -1.92
CHMP2AO43633 BX649567.1-201ENST00000642071 1134 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 GABRG2-229ENST00000641017 3628 ntBASIC3.05□□□□□ -1.92
CHMP2AO43633 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CHMP2AO43633 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.05□□□□□ -1.92
CHMP2AO43633 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
CHMP2AO43633 SGO1P2-201ENST00000429458 1589 ntBASIC3.04□□□□□ -1.92
CHMP2AO43633 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CHMP2AO43633 MTND5P31-201ENST00000419366 1374 ntBASIC3.04□□□□□ -1.92
CHMP2AO43633 AC025263.3-201ENST00000622965 1396 ntBASIC3.04□□□□□ -1.92
CHMP2AO43633 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.04□□□□□ -1.92
CHMP2AO43633 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
CHMP2AO43633 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CHMP2AO43633 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CHMP2AO43633 FTLP6-201ENST00000355274 422 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms