Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RN7SKP234-201ENST00000517173 224 ntBASIC4□□□□□ -1.77
SMAD6O43541 AC087276.1-201ENST00000529659 480 ntBASIC4□□□□□ -1.77
SMAD6O43541 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4□□□□□ -1.77
SMAD6O43541 POLR2KP1-201ENST00000553226 168 ntBASIC4□□□□□ -1.77
SMAD6O43541 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4□□□□□ -1.77
SMAD6O43541 HSPE1P5-201ENST00000561489 272 ntBASIC4□□□□□ -1.77
SMAD6O43541 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4□□□□□ -1.77
SMAD6O43541 AC034105.4-201ENST00000568304 277 ntBASIC4□□□□□ -1.77
SMAD6O43541 AC006270.2-201ENST00000578523 652 ntBASIC4□□□□□ -1.77
SMAD6O43541 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4□□□□□ -1.77
SMAD6O43541 AC006130.2-201ENST00000586202 326 ntBASIC4□□□□□ -1.77
SMAD6O43541 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4□□□□□ -1.77
SMAD6O43541 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4□□□□□ -1.77
SMAD6O43541 AC068790.5-201ENST00000602741 355 ntBASIC4□□□□□ -1.77
SMAD6O43541 AP000860.1-201ENST00000605250 559 ntBASIC4□□□□□ -1.77
SMAD6O43541 AC012603.1-201ENST00000606424 528 ntBASIC4□□□□□ -1.77
SMAD6O43541 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4□□□□□ -1.77
SMAD6O43541 AC091304.9-201ENST00000612091 226 ntBASIC4□□□□□ -1.77
SMAD6O43541 AC091834.1-201ENST00000614543 472 ntBASIC4□□□□□ -1.77
SMAD6O43541 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4□□□□□ -1.77
SMAD6O43541 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4□□□□□ -1.77
SMAD6O43541 AC018816.2-201ENST00000621460 353 ntBASIC4□□□□□ -1.77
SMAD6O43541 AL354798.1-201ENST00000622505 329 ntBASIC4□□□□□ -1.77
SMAD6O43541 FP236240.3-201ENST00000623061 327 ntBASIC4□□□□□ -1.77
SMAD6O43541 AC093648.1-201ENST00000623546 606 ntBASIC4□□□□□ -1.77
SMAD6O43541 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4□□□□□ -1.77
SMAD6O43541 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
SMAD6O43541 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SMAD6O43541 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
SMAD6O43541 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4□□□□□ -1.77
SMAD6O43541 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4□□□□□ -1.77
SMAD6O43541 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SMAD6O43541 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4□□□□□ -1.77
SMAD6O43541 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SMAD6O43541 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4□□□□□ -1.77
SMAD6O43541 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SMAD6O43541 AP002001.2-201ENST00000529025 1469 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SMAD6O43541 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.99□□□□□ -1.77
SMAD6O43541 RNU5F-6P-201ENST00000362979 116 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SMAD6O43541 RPL23AP29-201ENST00000397284 453 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 AL445189.1-201ENST00000405722 338 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 MIR1277-201ENST00000408536 78 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 MIR1251-201ENST00000408552 70 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 SNORA3C-201ENST00000408792 125 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.99□□□□□ -1.77
SMAD6O43541 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.99□□□□□ -1.77
SMAD6O43541 MTATP6P27-201ENST00000416987 621 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.99□□□□□ -1.77
SMAD6O43541 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.99□□□□□ -1.77
SMAD6O43541 B3GNT2P1-201ENST00000434960 952 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.99□□□□□ -1.77
SMAD6O43541 AC083863.1-201ENST00000438811 231 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 AL022238.1-201ENST00000442557 355 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 TPT1P14-201ENST00000448018 505 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 Z99127.3-201ENST00000448158 395 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 NFU1P2-201ENST00000448700 469 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.99□□□□□ -1.77
SMAD6O43541 CEACAMP4-201ENST00000457676 421 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 RPS3AP17-201ENST00000472594 777 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 AC092451.1-201ENST00000480211 153 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 AC078817.1-201ENST00000492623 435 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 RN7SL323P-201ENST00000494712 295 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SMAD6O43541 ARL2BPP6-201ENST00000512757 439 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 AC022483.1-201ENST00000514020 567 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.99□□□□□ -1.77
SMAD6O43541 AC087369.1-201ENST00000520775 996 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.99□□□□□ -1.77
SMAD6O43541 MIR5685-201ENST00000579080 79 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.99□□□□□ -1.77
SMAD6O43541 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.99□□□□□ -1.77
SMAD6O43541 AC005332.6-201ENST00000613178 446 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 AC063943.3-201ENST00000615562 356 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SMAD6O43541 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.99□□□□□ -1.77
SMAD6O43541 FAM157B-203ENST00000639350 358 ntBASIC3.99□□□□□ -1.77
SMAD6O43541 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SMAD6O43541 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SMAD6O43541 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
SMAD6O43541 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SMAD6O43541 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SMAD6O43541 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.98□□□□□ -1.77
SMAD6O43541 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.98□□□□□ -1.77
SMAD6O43541 AC027290.2-201ENST00000623210 18662 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SMAD6O43541 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SMAD6O43541 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SMAD6O43541 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SMAD6O43541 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SMAD6O43541 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SMAD6O43541 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SMAD6O43541 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
SMAD6O43541 SNORD6-201ENST00000365444 73 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 MIR30B-201ENST00000384850 88 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SMAD6O43541 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.98□□□□□ -1.77
SMAD6O43541 CYCSP19-201ENST00000411715 316 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 HMGN1P14-201ENST00000412459 517 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms