Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.32□□□□□ -1.72
PROM1O43490 USP9YP15-201ENST00000442391 422 ntBASIC4.32□□□□□ -1.72
PROM1O43490 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.32□□□□□ -1.72
PROM1O43490 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.32□□□□□ -1.72
PROM1O43490 CEACAMP6-201ENST00000452007 574 ntBASIC4.32□□□□□ -1.72
PROM1O43490 ELOCP23-201ENST00000452014 332 ntBASIC4.32□□□□□ -1.72
PROM1O43490 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.32□□□□□ -1.72
PROM1O43490 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.32□□□□□ -1.72
PROM1O43490 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.32□□□□□ -1.72
PROM1O43490 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.32□□□□□ -1.72
PROM1O43490 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PROM1O43490 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.32□□□□□ -1.72
PROM1O43490 AC099489.2-201ENST00000574976 260 ntBASIC4.32□□□□□ -1.72
PROM1O43490 MIR1254-2-201ENST00000579553 63 ntBASIC4.32□□□□□ -1.72
PROM1O43490 AC060780.3-201ENST00000589464 80 ntBASIC4.32□□□□□ -1.72
PROM1O43490 AC020910.2-201ENST00000603635 610 ntBASIC4.32□□□□□ -1.72
PROM1O43490 AL391646.1-201ENST00000603860 190 ntBASIC4.32□□□□□ -1.72
PROM1O43490 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.32□□□□□ -1.72
PROM1O43490 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.32□□□□□ -1.72
PROM1O43490 AC068831.8-201ENST00000620171 435 ntBASIC4.32□□□□□ -1.72
PROM1O43490 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PROM1O43490 MIR3662-201ENST00000637030 95 ntBASIC4.32□□□□□ -1.72
PROM1O43490 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.32□□□□□ -1.72
PROM1O43490 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.32□□□□□ -1.72
PROM1O43490 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PROM1O43490 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.32□□□□□ -1.72
PROM1O43490 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
PROM1O43490 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PROM1O43490 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PROM1O43490 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PROM1O43490 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PROM1O43490 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PROM1O43490 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PROM1O43490 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PROM1O43490 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PROM1O43490 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PROM1O43490 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.31□□□□□ -1.72
PROM1O43490 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PROM1O43490 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.31□□□□□ -1.72
PROM1O43490 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PROM1O43490 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PROM1O43490 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.31□□□□□ -1.72
PROM1O43490 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PROM1O43490 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PROM1O43490 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.31□□□□□ -1.72
PROM1O43490 RNU6-28P-201ENST00000362378 107 ntBASIC4.31□□□□□ -1.72
PROM1O43490 RNU6-181P-201ENST00000363225 107 ntBASIC4.31□□□□□ -1.72
PROM1O43490 SNORD113.2-201ENST00000364166 89 ntBASIC4.31□□□□□ -1.72
PROM1O43490 RNU6-282P-201ENST00000365357 103 ntBASIC4.31□□□□□ -1.72
PROM1O43490 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PROM1O43490 RNU6-1009P-201ENST00000390996 107 ntBASIC4.31□□□□□ -1.72
PROM1O43490 RN7SKP27-201ENST00000410684 333 ntBASIC4.31□□□□□ -1.72
PROM1O43490 RNU2-41P-201ENST00000410991 178 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AMD1P2-201ENST00000412936 992 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AC245054.1-201ENST00000420944 258 ntBASIC4.31□□□□□ -1.72
PROM1O43490 RPS12P5-201ENST00000423449 371 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.31□□□□□ -1.72
PROM1O43490 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.31□□□□□ -1.72
PROM1O43490 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.31□□□□□ -1.72
PROM1O43490 AC132479.1-201ENST00000449160 144 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AL162591.2-201ENST00000449634 317 ntBASIC4.31□□□□□ -1.72
PROM1O43490 RPL37P6-202ENST00000464216 403 ntBASIC4.31□□□□□ -1.72
PROM1O43490 PLGLA-201ENST00000465668 449 ntBASIC4.31□□□□□ -1.72
PROM1O43490 RPS26P28-201ENST00000470806 348 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AC087312.1-201ENST00000471411 480 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AP000893.1-201ENST00000474462 794 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AC023194.1-201ENST00000493084 308 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AC079382.1-201ENST00000493346 557 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AC091951.2-201ENST00000500762 203 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.31□□□□□ -1.72
PROM1O43490 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.31□□□□□ -1.72
PROM1O43490 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.31□□□□□ -1.72
PROM1O43490 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.31□□□□□ -1.72
PROM1O43490 RNU6-1281P-201ENST00000516223 105 ntBASIC4.31□□□□□ -1.72
PROM1O43490 Vault.3-201ENST00000516676 95 ntBASIC4.31□□□□□ -1.72
PROM1O43490 RNU6-445P-201ENST00000516949 107 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.31□□□□□ -1.72
PROM1O43490 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.31□□□□□ -1.72
PROM1O43490 AL512310.1-201ENST00000548639 172 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.31□□□□□ -1.72
PROM1O43490 SUB1P2-201ENST00000556401 297 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AL359212.1-201ENST00000556608 614 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.31□□□□□ -1.72
PROM1O43490 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.31□□□□□ -1.72
PROM1O43490 MTND6P33-201ENST00000571794 183 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AC090616.5-202ENST00000582111 297 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AC091178.1-203ENST00000584586 279 ntBASIC4.31□□□□□ -1.72
PROM1O43490 RPL12P25-202ENST00000598100 674 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AC112230.1-201ENST00000604342 547 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AL590392.1-201ENST00000604960 446 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AC121334.2-201ENST00000605387 271 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AC008966.2-201ENST00000606157 453 ntBASIC4.31□□□□□ -1.72
PROM1O43490 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.31□□□□□ -1.72
PROM1O43490 MIR7154-201ENST00000620673 73 ntBASIC4.31□□□□□ -1.72
PROM1O43490 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.31□□□□□ -1.72
PROM1O43490 CYP3A51P-201ENST00000633513 256 ntBASIC4.31□□□□□ -1.72
PROM1O43490 MIR4496-201ENST00000635896 61 ntBASIC4.31□□□□□ -1.72
PROM1O43490 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.31□□□□□ -1.72
PROM1O43490 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PROM1O43490 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms