Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 NIPA2P1-201ENST00000426223 976 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.18□□□□□ -1.9
RIPK2O43353 PSMA6P3-201ENST00000428242 164 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.18□□□□□ -1.9
RIPK2O43353 RPL23AP74-201ENST00000437246 471 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 MUPP-201ENST00000438111 566 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 AL096829.2-201ENST00000446582 742 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 USP9YP34-201ENST00000453983 808 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 AC034236.1-201ENST00000469891 373 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.18□□□□□ -1.9
RIPK2O43353 ACTR3P3-201ENST00000480448 893 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RIPK2O43353 ARL4AP2-201ENST00000507378 601 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 AL359273.1-201ENST00000510918 627 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 AC112198.4-201ENST00000515450 351 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 AC023632.1-201ENST00000518463 375 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 AP003102.1-201ENST00000525638 661 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 CR383656.7-201ENST00000548164 174 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.18□□□□□ -1.9
RIPK2O43353 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.18□□□□□ -1.9
RIPK2O43353 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.18□□□□□ -1.9
RIPK2O43353 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.18□□□□□ -1.9
RIPK2O43353 CCDC58P3-201ENST00000590792 430 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 AC079089.3-201ENST00000603094 673 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 AL035411.2-201ENST00000604022 421 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 AC073657.2-201ENST00000605661 303 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 AC078880.5-201ENST00000617845 421 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 AC068880.4-201ENST00000623082 495 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.18□□□□□ -1.9
RIPK2O43353 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RIPK2O43353 Z83843.1-201ENST00000604070 3685 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.17□□□□□ -1.9
RIPK2O43353 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.17□□□□□ -1.9
RIPK2O43353 AC009812.4-201ENST00000569134 1805 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.17□□□□□ -1.9
RIPK2O43353 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.17□□□□□ -1.9
RIPK2O43353 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RIPK2O43353 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RIPK2O43353 SNORA70.2-201ENST00000364506 135 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 DYNLT3P1-201ENST00000378574 347 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
RIPK2O43353 AC110754.1-201ENST00000399740 601 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 BX323014.1-201ENST00000412876 237 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.17□□□□□ -1.9
RIPK2O43353 AC027644.1-201ENST00000419595 298 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 BEND7P1-201ENST00000422058 457 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.17□□□□□ -1.9
RIPK2O43353 AC104332.2-201ENST00000429959 156 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 AL445584.1-201ENST00000431451 330 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.17□□□□□ -1.9
RIPK2O43353 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.17□□□□□ -1.9
RIPK2O43353 RAC1P7-201ENST00000445367 377 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 HMGN1P5-201ENST00000448591 263 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.17□□□□□ -1.9
RIPK2O43353 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.17□□□□□ -1.9
RIPK2O43353 AC092798.1-201ENST00000458542 409 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 RPS26P21-201ENST00000475397 348 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.17□□□□□ -1.9
RIPK2O43353 AC108860.1-201ENST00000484521 383 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 RN7SL20P-201ENST00000488827 297 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.17□□□□□ -1.9
RIPK2O43353 COX7A2P2-201ENST00000505291 250 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 AC006445.2-201ENST00000510061 472 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 MTCO3P27-201ENST00000514397 196 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.17□□□□□ -1.9
RIPK2O43353 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.17□□□□□ -1.9
RIPK2O43353 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.17□□□□□ -1.9
RIPK2O43353 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.17□□□□□ -1.9
RIPK2O43353 MIR4506-201ENST00000584693 77 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.17□□□□□ -1.9
RIPK2O43353 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.17□□□□□ -1.9
RIPK2O43353 RPL23AP78-201ENST00000599928 470 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 MTATP6P2-201ENST00000603319 678 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.17□□□□□ -1.9
RIPK2O43353 MIR378J-201ENST00000611988 109 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 AC100793.4-201ENST00000613683 429 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 CYCSP41-201ENST00000616920 296 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 AC027309.3-201ENST00000623419 351 ntBASIC3.17□□□□□ -1.9
RIPK2O43353 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RIPK2O43353 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RIPK2O43353 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
RIPK2O43353 TPTE2P4-201ENST00000258589 1605 ntBASIC3.16□□□□□ -1.9
RIPK2O43353 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RIPK2O43353 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RIPK2O43353 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RIPK2O43353 RNA5SP124-201ENST00000362739 110 ntBASIC3.16□□□□□ -1.9
RIPK2O43353 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.16□□□□□ -1.9
RIPK2O43353 RNU6-657P-201ENST00000383904 107 ntBASIC3.16□□□□□ -1.9
RIPK2O43353 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.16□□□□□ -1.9
RIPK2O43353 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.16□□□□□ -1.9
RIPK2O43353 BX842559.1-201ENST00000419615 532 ntBASIC3.16□□□□□ -1.9
RIPK2O43353 HMGN2P30-201ENST00000423237 256 ntBASIC3.16□□□□□ -1.9
RIPK2O43353 AC004975.1-201ENST00000428733 208 ntBASIC3.16□□□□□ -1.9
RIPK2O43353 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.16□□□□□ -1.9
RIPK2O43353 AC108734.1-201ENST00000439549 399 ntBASIC3.16□□□□□ -1.9
RIPK2O43353 VN1R10P-201ENST00000447106 875 ntBASIC3.16□□□□□ -1.9
RIPK2O43353 GAPDHP27-201ENST00000447427 1020 ntBASIC3.16□□□□□ -1.9
RIPK2O43353 NUTF2P7-201ENST00000453086 375 ntBASIC3.16□□□□□ -1.9
RIPK2O43353 SUMO2P2-201ENST00000456482 255 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms