Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AC012417.1-201ENST00000582307 1039 ntBASIC3.64□□□□□ -1.83
SMAD9O15198 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SMAD9O15198 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.64□□□□□ -1.83
SMAD9O15198 AL031775.1-201ENST00000607014 887 ntBASIC3.64□□□□□ -1.83
SMAD9O15198 AC112200.1-201ENST00000625015 234 ntBASIC3.64□□□□□ -1.83
SMAD9O15198 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMAD9O15198 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMAD9O15198 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMAD9O15198 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.64□□□□□ -1.83
SMAD9O15198 AP001350.1-201ENST00000601906 1524 ntBASIC3.64□□□□□ -1.83
SMAD9O15198 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.64□□□□□ -1.83
SMAD9O15198 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SMAD9O15198 USP8P1-201ENST00000494673 3183 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.63□□□□□ -1.83
SMAD9O15198 AC006378.2-201ENST00000623178 2476 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SMAD9O15198 RLIMP1-201ENST00000339626 1680 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.63□□□□□ -1.83
SMAD9O15198 SNORD35B-201ENST00000363660 87 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SMAD9O15198 RNU6-769P-201ENST00000384407 104 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 PPIAP31-201ENST00000405422 495 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 RPL21P65-201ENST00000406094 466 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.63□□□□□ -1.83
SMAD9O15198 NPM1P11-201ENST00000417106 855 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 AL137014.1-201ENST00000420490 1226 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 AL365338.1-201ENST00000422282 858 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 AL389915.1-201ENST00000422463 466 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SMAD9O15198 OR5BE1P-201ENST00000425977 939 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.63□□□□□ -1.83
SMAD9O15198 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.63□□□□□ -1.83
SMAD9O15198 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SMAD9O15198 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.63□□□□□ -1.83
SMAD9O15198 RPL37P21-201ENST00000435890 276 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.63□□□□□ -1.83
SMAD9O15198 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.63□□□□□ -1.83
SMAD9O15198 EPS15P1-201ENST00000448836 336 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 SNORA84-201ENST00000459229 133 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 RPL23AP62-201ENST00000463396 453 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 AL024509.2-201ENST00000493462 493 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 NIPA2P2-201ENST00000496376 1083 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.63□□□□□ -1.83
SMAD9O15198 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.63□□□□□ -1.83
SMAD9O15198 RNU6-1095P-201ENST00000516148 108 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 RN7SKP289-201ENST00000517244 295 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 NDUFA5P2-201ENST00000519723 344 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.63□□□□□ -1.83
SMAD9O15198 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.63□□□□□ -1.83
SMAD9O15198 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.63□□□□□ -1.83
SMAD9O15198 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
SMAD9O15198 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.63□□□□□ -1.83
SMAD9O15198 AC034105.4-201ENST00000568304 277 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 AC034268.2-201ENST00000571784 482 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 AC025627.2-201ENST00000576220 160 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.63□□□□□ -1.83
SMAD9O15198 PIGPP4-201ENST00000584447 307 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.63□□□□□ -1.83
SMAD9O15198 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SMAD9O15198 AC022916.3-201ENST00000592961 742 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 AL022161.1-201ENST00000604390 213 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 BCRP9-201ENST00000605312 388 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 AC073114.1-201ENST00000612027 490 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 AC112484.5-201ENST00000624189 228 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 AC034229.5-201ENST00000624258 185 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 AC048347.1-201ENST00000624621 427 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 AC091965.5-201ENST00000624785 342 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.63□□□□□ -1.83
SMAD9O15198 OR5BE1P-202ENST00000641168 1176 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMAD9O15198 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SMAD9O15198 AL513185.3-201ENST00000433335 1300 ntBASIC3.63□□□□□ -1.83
SMAD9O15198 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMAD9O15198 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMAD9O15198 AC116096.1-201ENST00000566804 2314 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMAD9O15198 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.62□□□□□ -1.83
SMAD9O15198 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMAD9O15198 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMAD9O15198 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMAD9O15198 SPRR2C-201ENST00000290702 219 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMAD9O15198 RNU5F-6P-201ENST00000362979 116 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 RNU6-1181P-201ENST00000384191 106 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 SNORD116-1-201ENST00000384335 95 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
SMAD9O15198 MTCYBP36-201ENST00000404146 440 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.62□□□□□ -1.83
SMAD9O15198 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.62□□□□□ -1.83
SMAD9O15198 AC129850.1-201ENST00000436203 508 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 AC091862.1-201ENST00000438016 1100 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.62□□□□□ -1.83
SMAD9O15198 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.62□□□□□ -1.83
SMAD9O15198 RPL7P36-201ENST00000444633 681 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 BMI1P1-201ENST00000445879 941 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 snoU13.24-201ENST00000458998 104 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.62□□□□□ -1.83
SMAD9O15198 AC021382.1-201ENST00000483523 359 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 RPS26P15-201ENST00000488067 348 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms