Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.6□□□□□ -1.83
TO15178 AP001004.1-201ENST00000582468 324 ntBASIC3.6□□□□□ -1.83
TO15178 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TO15178 MTCYBP22-201ENST00000603788 447 ntBASIC3.6□□□□□ -1.83
TO15178 AC128687.1-201ENST00000605304 619 ntBASIC3.6□□□□□ -1.83
TO15178 AC097065.2-201ENST00000608159 533 ntBASIC3.6□□□□□ -1.83
TO15178 MIR486-1-201ENST00000612171 68 ntBASIC3.6□□□□□ -1.83
TO15178 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.6□□□□□ -1.83
TO15178 AC091931.1-201ENST00000623488 728 ntBASIC3.6□□□□□ -1.83
TO15178 CU459211.1-201ENST00000635667 749 ntBASIC3.6□□□□□ -1.83
TO15178 CRYM-AS1-204ENST00000637983 556 ntBASIC3.6□□□□□ -1.83
TO15178 AC006927.3-201ENST00000638789 384 ntBASIC3.6□□□□□ -1.83
TO15178 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.6□□□□□ -1.83
TO15178 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TO15178 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TO15178 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TO15178 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.6□□□□□ -1.83
TO15178 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.6□□□□□ -1.83
TO15178 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
TO15178 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.59□□□□□ -1.83
TO15178 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
TO15178 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TO15178 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TO15178 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
TO15178 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TO15178 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
TO15178 RNU6-777P-201ENST00000364265 104 ntBASIC3.59□□□□□ -1.83
TO15178 RNU6-660P-201ENST00000364566 109 ntBASIC3.59□□□□□ -1.83
TO15178 RNU6-343P-201ENST00000364709 104 ntBASIC3.59□□□□□ -1.83
TO15178 RNA5SP235-201ENST00000365411 114 ntBASIC3.59□□□□□ -1.83
TO15178 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.59□□□□□ -1.83
TO15178 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.59□□□□□ -1.83
TO15178 RPS3AP26-201ENST00000398259 784 ntBASIC3.59□□□□□ -1.83
TO15178 MIR1305-201ENST00000408300 86 ntBASIC3.59□□□□□ -1.83
TO15178 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.59□□□□□ -1.83
TO15178 RNU6-920P-201ENST00000410926 92 ntBASIC3.59□□□□□ -1.83
TO15178 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.59□□□□□ -1.83
TO15178 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.59□□□□□ -1.83
TO15178 AC009518.2-201ENST00000418056 731 ntBASIC3.59□□□□□ -1.83
TO15178 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.59□□□□□ -1.83
TO15178 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.59□□□□□ -1.83
TO15178 AL390023.1-201ENST00000428836 262 ntBASIC3.59□□□□□ -1.83
TO15178 MTCYBP45-201ENST00000435243 565 ntBASIC3.59□□□□□ -1.83
TO15178 LSM1P1-201ENST00000438629 273 ntBASIC3.59□□□□□ -1.83
TO15178 AL356535.1-201ENST00000440335 398 ntBASIC3.59□□□□□ -1.83
TO15178 UBE2D3P4-201ENST00000441973 436 ntBASIC3.59□□□□□ -1.83
TO15178 Z83846.1-201ENST00000446798 265 ntBASIC3.59□□□□□ -1.83
TO15178 RPS17P13-201ENST00000448974 407 ntBASIC3.59□□□□□ -1.83
TO15178 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.59□□□□□ -1.83
TO15178 VN1R105P-201ENST00000486595 910 ntBASIC3.59□□□□□ -1.83
TO15178 AL024509.2-201ENST00000493462 493 ntBASIC3.59□□□□□ -1.83
TO15178 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.59□□□□□ -1.83
TO15178 AC022447.3-201ENST00000506865 495 ntBASIC3.59□□□□□ -1.83
TO15178 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
TO15178 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.59□□□□□ -1.83
TO15178 AC034159.1-201ENST00000513885 583 ntBASIC3.59□□□□□ -1.83
TO15178 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.59□□□□□ -1.83
TO15178 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.59□□□□□ -1.83
TO15178 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.59□□□□□ -1.83
TO15178 AC087373.1-201ENST00000524920 491 ntBASIC3.59□□□□□ -1.83
TO15178 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.59□□□□□ -1.83
TO15178 MED28P5-201ENST00000528254 438 ntBASIC3.59□□□□□ -1.83
TO15178 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.59□□□□□ -1.83
TO15178 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.59□□□□□ -1.83
TO15178 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.59□□□□□ -1.83
TO15178 SETP7-201ENST00000552169 453 ntBASIC3.59□□□□□ -1.83
TO15178 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.59□□□□□ -1.83
TO15178 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.59□□□□□ -1.83
TO15178 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.59□□□□□ -1.83
TO15178 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.59□□□□□ -1.83
TO15178 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.59□□□□□ -1.83
TO15178 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.59□□□□□ -1.83
TO15178 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.59□□□□□ -1.83
TO15178 AC022916.3-201ENST00000592961 742 ntBASIC3.59□□□□□ -1.83
TO15178 AC106028.5-201ENST00000610332 395 ntBASIC3.59□□□□□ -1.83
TO15178 MIR6875-201ENST00000617506 72 ntBASIC3.59□□□□□ -1.83
TO15178 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.59□□□□□ -1.83
TO15178 AC008443.7-201ENST00000622195 246 ntBASIC3.59□□□□□ -1.83
TO15178 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.59□□□□□ -1.83
TO15178 BDP1P-201ENST00000582658 1990 ntBASIC3.59□□□□□ -1.83
TO15178 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TO15178 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
TO15178 AC004925.1-201ENST00000624256 2706 ntBASIC3.58□□□□□ -1.84
TO15178 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
TO15178 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
TO15178 AC007066.1-201ENST00000392902 381 ntBASIC3.58□□□□□ -1.84
TO15178 RPS7P15-201ENST00000415804 584 ntBASIC3.58□□□□□ -1.84
TO15178 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TO15178 Z99497.1-201ENST00000421282 135 ntBASIC3.58□□□□□ -1.84
TO15178 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.58□□□□□ -1.84
TO15178 ARF4P2-201ENST00000430209 526 ntBASIC3.58□□□□□ -1.84
TO15178 AC087650.1-201ENST00000431445 468 ntBASIC3.58□□□□□ -1.84
TO15178 MTND4LP10-201ENST00000435146 291 ntBASIC3.58□□□□□ -1.84
TO15178 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.58□□□□□ -1.84
TO15178 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.58□□□□□ -1.84
TO15178 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.58□□□□□ -1.84
TO15178 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.58□□□□□ -1.84
TO15178 AL353691.1-201ENST00000451332 387 ntBASIC3.58□□□□□ -1.84
TO15178 RPS24P6-201ENST00000452670 400 ntBASIC3.58□□□□□ -1.84
TO15178 snoU13.24-201ENST00000458998 104 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms