Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 MTND4P26-201ENST00000415971 1359 ntBASIC2.15□□□□□ -2.06
CACNA1AO00555 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.15□□□□□ -2.06
CACNA1AO00555 SNRPEP3-201ENST00000338402 276 ntBASIC2.15□□□□□ -2.07
CACNA1AO00555 RNA5SP190-201ENST00000365222 118 ntBASIC2.15□□□□□ -2.07
CACNA1AO00555 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.15□□□□□ -2.07
CACNA1AO00555 HMGB3P21-201ENST00000452483 547 ntBASIC2.15□□□□□ -2.07
CACNA1AO00555 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.15□□□□□ -2.07
CACNA1AO00555 AC098848.2-201ENST00000588023 330 ntBASIC2.15□□□□□ -2.07
CACNA1AO00555 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.15□□□□□ -2.07
CACNA1AO00555 HMGN2P28-201ENST00000606102 262 ntBASIC2.15□□□□□ -2.07
CACNA1AO00555 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CACNA1AO00555 AL353743.4-201ENST00000422653 1547 ntBASIC2.15□□□□□ -2.07
CACNA1AO00555 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CACNA1AO00555 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CACNA1AO00555 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CACNA1AO00555 MIR216A-201ENST00000385063 110 ntBASIC2.15□□□□□ -2.07
CACNA1AO00555 HMGB1P27-201ENST00000431429 603 ntBASIC2.15□□□□□ -2.07
CACNA1AO00555 AC010469.1-201ENST00000463864 576 ntBASIC2.15□□□□□ -2.07
CACNA1AO00555 MYL12AP1-201ENST00000518490 515 ntBASIC2.15□□□□□ -2.07
CACNA1AO00555 AC008127.2-201ENST00000549925 1075 ntBASIC2.15□□□□□ -2.07
CACNA1AO00555 MIR5092-201ENST00000583139 88 ntBASIC2.15□□□□□ -2.07
CACNA1AO00555 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.15□□□□□ -2.07
CACNA1AO00555 AC009237.17-201ENST00000618111 748 ntBASIC2.15□□□□□ -2.07
CACNA1AO00555 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.15□□□□□ -2.07
CACNA1AO00555 RPL31P1-201ENST00000398116 372 ntBASIC2.14□□□□□ -2.07
CACNA1AO00555 HMGB3P2-201ENST00000411913 584 ntBASIC2.14□□□□□ -2.07
CACNA1AO00555 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.14□□□□□ -2.07
CACNA1AO00555 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.14□□□□□ -2.07
CACNA1AO00555 RPS29P1-201ENST00000465274 159 ntBASIC2.14□□□□□ -2.07
CACNA1AO00555 AC011979.1-201ENST00000472300 483 ntBASIC2.14□□□□□ -2.07
CACNA1AO00555 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.14□□□□□ -2.07
CACNA1AO00555 CKS1BP7-201ENST00000522230 235 ntBASIC2.14□□□□□ -2.07
CACNA1AO00555 AC025260.1-201ENST00000548858 430 ntBASIC2.14□□□□□ -2.07
CACNA1AO00555 AC091834.1-201ENST00000614543 472 ntBASIC2.14□□□□□ -2.07
CACNA1AO00555 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
CACNA1AO00555 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CACNA1AO00555 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
CACNA1AO00555 SNORD56.3-201ENST00000363507 71 ntBASIC2.14□□□□□ -2.07
CACNA1AO00555 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CACNA1AO00555 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.14□□□□□ -2.07
CACNA1AO00555 GLYCAM1-201ENST00000546596 285 ntBASIC2.14□□□□□ -2.07
CACNA1AO00555 AC006272.2-201ENST00000594725 163 ntBASIC2.14□□□□□ -2.07
CACNA1AO00555 AC004825.2-201ENST00000616634 455 ntBASIC2.14□□□□□ -2.07
CACNA1AO00555 OR4G1P-203ENST00000641984 1631 ntBASIC2.14□□□□□ -2.07
CACNA1AO00555 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CACNA1AO00555 MTND4P1-201ENST00000457501 1466 ntBASIC2.13□□□□□ -2.07
CACNA1AO00555 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CACNA1AO00555 KPNA2P1-201ENST00000458289 1591 ntBASIC2.13□□□□□ -2.07
CACNA1AO00555 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CACNA1AO00555 AC010329.2-201ENST00000595195 2737 ntBASIC2.13□□□□□ -2.07
CACNA1AO00555 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CACNA1AO00555 SNORA67.3-201ENST00000384366 140 ntBASIC2.13□□□□□ -2.07
CACNA1AO00555 AC019129.1-201ENST00000403786 261 ntBASIC2.13□□□□□ -2.07
CACNA1AO00555 AL158825.1-201ENST00000414735 521 ntBASIC2.13□□□□□ -2.07
CACNA1AO00555 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CACNA1AO00555 HMGB1P25-201ENST00000468402 607 ntBASIC2.13□□□□□ -2.07
CACNA1AO00555 SETP1-201ENST00000556014 845 ntBASIC2.13□□□□□ -2.07
CACNA1AO00555 AC103710.1-201ENST00000610003 901 ntBASIC2.13□□□□□ -2.07
CACNA1AO00555 AC087588.2-201ENST00000617667 426 ntBASIC2.13□□□□□ -2.07
CACNA1AO00555 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.13□□□□□ -2.07
CACNA1AO00555 AC123912.3-201ENST00000600907 1367 ntBASIC2.13□□□□□ -2.07
CACNA1AO00555 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.13□□□□□ -2.07
CACNA1AO00555 Y_RNA.85-201ENST00000363014 111 ntBASIC2.13□□□□□ -2.07
CACNA1AO00555 RNU1-100P-201ENST00000365255 165 ntBASIC2.13□□□□□ -2.07
CACNA1AO00555 U3.40-201ENST00000408706 208 ntBASIC2.13□□□□□ -2.07
CACNA1AO00555 RNA5SP127-201ENST00000411051 133 ntBASIC2.13□□□□□ -2.07
CACNA1AO00555 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.13□□□□□ -2.07
CACNA1AO00555 AC245517.5-201ENST00000611529 162 ntBASIC2.13□□□□□ -2.07
CACNA1AO00555 AL359198.2-201ENST00000611836 194 ntBASIC2.13□□□□□ -2.07
CACNA1AO00555 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.12□□□□□ -2.07
CACNA1AO00555 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
CACNA1AO00555 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
CACNA1AO00555 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CACNA1AO00555 RNA5SP456-201ENST00000364002 114 ntBASIC2.12□□□□□ -2.07
CACNA1AO00555 AL160275.2-201ENST00000412010 394 ntBASIC2.12□□□□□ -2.07
CACNA1AO00555 CST2P1-201ENST00000425770 87 ntBASIC2.12□□□□□ -2.07
CACNA1AO00555 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.12□□□□□ -2.07
CACNA1AO00555 AC107032.1-201ENST00000485945 480 ntBASIC2.12□□□□□ -2.07
CACNA1AO00555 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.12□□□□□ -2.07
CACNA1AO00555 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.12□□□□□ -2.07
CACNA1AO00555 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.12□□□□□ -2.07
CACNA1AO00555 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.12□□□□□ -2.07
CACNA1AO00555 BNIP3P7-201ENST00000605641 516 ntBASIC2.12□□□□□ -2.07
CACNA1AO00555 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.12□□□□□ -2.07
CACNA1AO00555 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CACNA1AO00555 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.12□□□□□ -2.07
CACNA1AO00555 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CACNA1AO00555 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.12□□□□□ -2.07
CACNA1AO00555 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.12□□□□□ -2.07
CACNA1AO00555 AC126177.8-201ENST00000618339 1015 ntBASIC2.12□□□□□ -2.07
CACNA1AO00555 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CACNA1AO00555 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.11□□□□□ -2.07
CACNA1AO00555 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CACNA1AO00555 RN7SKP226-201ENST00000364912 300 ntBASIC2.11□□□□□ -2.07
CACNA1AO00555 MTCYBP7-201ENST00000419540 1134 ntBASIC2.11□□□□□ -2.07
CACNA1AO00555 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.11□□□□□ -2.07
CACNA1AO00555 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.11□□□□□ -2.07
CACNA1AO00555 AC090819.1-201ENST00000523800 1111 ntBASIC2.11□□□□□ -2.07
CACNA1AO00555 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC2.11□□□□□ -2.07
CACNA1AO00555 AC010733.2-201ENST00000589496 5702 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms