Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.28□□□□□ -1.89
SLC28A1O00337 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SLC28A1O00337 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC28A1O00337 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SLC28A1O00337 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC28A1O00337 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC28A1O00337 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC28A1O00337 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SLC28A1O00337 RNU6-882P-201ENST00000391025 103 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 RPS7P13-201ENST00000413955 498 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 AC007390.1-201ENST00000415722 356 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC28A1O00337 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SLC28A1O00337 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC28A1O00337 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.27□□□□□ -1.89
SLC28A1O00337 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.27□□□□□ -1.89
SLC28A1O00337 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC28A1O00337 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC28A1O00337 RPS23P3-201ENST00000470993 430 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 AP002884.2-201ENST00000471647 395 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 AC017015.1-201ENST00000477387 286 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC28A1O00337 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC28A1O00337 AC112198.1-201ENST00000505369 1220 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 MTND4LP31-201ENST00000514859 294 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.27□□□□□ -1.89
SLC28A1O00337 DEFB131D-201ENST00000526803 184 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.27□□□□□ -1.89
SLC28A1O00337 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC28A1O00337 AL391156.1-201ENST00000554965 554 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC28A1O00337 CYCSP2-201ENST00000558168 301 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC28A1O00337 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.27□□□□□ -1.89
SLC28A1O00337 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC28A1O00337 AC090615.1-201ENST00000577519 154 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 MIR3160-1-201ENST00000577972 85 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 AC008507.1-201ENST00000587506 734 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC28A1O00337 BDH2P1-201ENST00000602288 736 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 AL390208.1-201ENST00000605885 644 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 AC006270.3-201ENST00000605967 1036 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 AC009974.1-201ENST00000608881 455 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 AC245297.2-201ENST00000610119 565 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 TUG1_1.1-201ENST00000610654 145 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 AC024941.1-201ENST00000612250 334 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC28A1O00337 AC005539.1-201ENST00000443768 1479 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SLC28A1O00337 AL022578.1-201ENST00000439330 1433 ntBASIC3.27□□□□□ -1.89
SLC28A1O00337 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SLC28A1O00337 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.26□□□□□ -1.89
SLC28A1O00337 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SLC28A1O00337 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.26□□□□□ -1.89
SLC28A1O00337 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SLC28A1O00337 RN7SKP280-201ENST00000364196 304 ntBASIC3.26□□□□□ -1.89
SLC28A1O00337 AL359837.1-201ENST00000381357 287 ntBASIC3.26□□□□□ -1.89
SLC28A1O00337 AL591034.1-201ENST00000407447 340 ntBASIC3.26□□□□□ -1.89
SLC28A1O00337 AC245291.1-201ENST00000419501 328 ntBASIC3.26□□□□□ -1.89
SLC28A1O00337 BEND7P1-201ENST00000422058 457 ntBASIC3.26□□□□□ -1.89
SLC28A1O00337 AL139421.1-201ENST00000423010 169 ntBASIC3.26□□□□□ -1.89
SLC28A1O00337 AC084290.1-201ENST00000434995 374 ntBASIC3.26□□□□□ -1.89
SLC28A1O00337 MTCYBP45-201ENST00000435243 565 ntBASIC3.26□□□□□ -1.89
SLC28A1O00337 SETP5-201ENST00000437270 562 ntBASIC3.26□□□□□ -1.89
SLC28A1O00337 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SLC28A1O00337 SSXP4-201ENST00000451349 245 ntBASIC3.26□□□□□ -1.89
SLC28A1O00337 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC28A1O00337 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.26□□□□□ -1.89
SLC28A1O00337 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC28A1O00337 RN7SKP21-201ENST00000516503 220 ntBASIC3.26□□□□□ -1.89
SLC28A1O00337 AC103843.2-201ENST00000530523 682 ntBASIC3.26□□□□□ -1.89
SLC28A1O00337 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SLC28A1O00337 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC28A1O00337 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.26□□□□□ -1.89
SLC28A1O00337 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC28A1O00337 AL390240.1-201ENST00000612950 384 ntBASIC3.26□□□□□ -1.89
SLC28A1O00337 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.26□□□□□ -1.89
SLC28A1O00337 AC002546.1-201ENST00000588041 2504 ntBASIC3.26□□□□□ -1.89
SLC28A1O00337 AC092326.2-201ENST00000624772 1561 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC28A1O00337 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.25□□□□□ -1.89
SLC28A1O00337 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SLC28A1O00337 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SLC28A1O00337 RNA5SP383-201ENST00000362934 120 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 RPS15AP38-201ENST00000413110 372 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 AL592310.1-201ENST00000414330 671 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC28A1O00337 RPL21P32-201ENST00000419877 477 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC28A1O00337 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC28A1O00337 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC28A1O00337 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC28A1O00337 RPS25P9-201ENST00000435591 252 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 ISCA1P2-201ENST00000438679 421 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 MTCYBP31-201ENST00000438855 1122 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 MTCYBP34-201ENST00000439552 670 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 HMGB3P11-201ENST00000440127 604 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 BX322784.1-201ENST00000455793 1077 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 AC092754.2-201ENST00000463506 460 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 RPS27AP1-201ENST00000475545 471 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms