Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
UPK1AO00322 RPL7P10-201ENST00000417407 739 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 HSPE1P1-201ENST00000421494 318 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.59□□□□□ -1.99
UPK1AO00322 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.59□□□□□ -1.99
UPK1AO00322 RPL23AP74-201ENST00000437246 471 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 AP000705.1-201ENST00000454567 350 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.59□□□□□ -1.99
UPK1AO00322 RPS4XP6-201ENST00000477670 797 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 OR5H5P-201ENST00000503164 928 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.59□□□□□ -1.99
UPK1AO00322 RNU6-416P-201ENST00000516265 103 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 RNU6-826P-201ENST00000516827 104 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 RNU6-56P-201ENST00000516986 93 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 AC019227.1-201ENST00000526902 510 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 AP000916.1-201ENST00000533869 835 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.59□□□□□ -1.99
UPK1AO00322 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.59□□□□□ -1.99
UPK1AO00322 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.59□□□□□ -1.99
UPK1AO00322 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.59□□□□□ -1.99
UPK1AO00322 CYCSP39-201ENST00000565821 309 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 MIR3670-2-201ENST00000582974 65 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 MIR3670-1-201ENST00000584160 65 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 MIR3670-3-201ENST00000584855 65 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.59□□□□□ -1.99
UPK1AO00322 AL160237.3-201ENST00000604114 1013 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 AL161756.2-201ENST00000604597 246 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 AC128687.1-201ENST00000605304 619 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 MIR3670-4-201ENST00000612260 65 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 AC092650.2-201ENST00000619984 902 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 HPVC1-201ENST00000629899 1198 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.59□□□□□ -1.99
UPK1AO00322 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.59□□□□□ -2
UPK1AO00322 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.59□□□□□ -2
UPK1AO00322 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -2
UPK1AO00322 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
UPK1AO00322 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
UPK1AO00322 RNU6-792P-201ENST00000363490 107 ntBASIC2.58□□□□□ -2
UPK1AO00322 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.58□□□□□ -2
UPK1AO00322 MIR128-1-201ENST00000384921 82 ntBASIC2.58□□□□□ -2
UPK1AO00322 SNORA48.2-201ENST00000390926 124 ntBASIC2.58□□□□□ -2
UPK1AO00322 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.58□□□□□ -2
UPK1AO00322 RNU4-65P-201ENST00000410473 140 ntBASIC2.58□□□□□ -2
UPK1AO00322 OR51A3P-201ENST00000413596 924 ntBASIC2.58□□□□□ -2
UPK1AO00322 AL158050.1-201ENST00000416077 457 ntBASIC2.58□□□□□ -2
UPK1AO00322 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.58□□□□□ -2
UPK1AO00322 AL645937.1-202ENST00000421799 937 ntBASIC2.58□□□□□ -2
UPK1AO00322 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.58□□□□□ -2
UPK1AO00322 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.58□□□□□ -2
UPK1AO00322 RPS6P14-201ENST00000425165 719 ntBASIC2.58□□□□□ -2
UPK1AO00322 AL035410.1-201ENST00000427409 427 ntBASIC2.58□□□□□ -2
UPK1AO00322 AC006548.1-201ENST00000427470 102 ntBASIC2.58□□□□□ -2
UPK1AO00322 AC109583.1-201ENST00000432156 268 ntBASIC2.58□□□□□ -2
UPK1AO00322 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.58□□□□□ -2
UPK1AO00322 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.58□□□□□ -2
UPK1AO00322 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.58□□□□□ -2
UPK1AO00322 AL135938.1-201ENST00000443141 297 ntBASIC2.58□□□□□ -2
UPK1AO00322 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.58□□□□□ -2
UPK1AO00322 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.58□□□□□ -2
UPK1AO00322 AC080014.1-201ENST00000496877 1201 ntBASIC2.58□□□□□ -2
UPK1AO00322 TBCAP3-201ENST00000512475 312 ntBASIC2.58□□□□□ -2
UPK1AO00322 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.58□□□□□ -2
UPK1AO00322 SNORA74D-201ENST00000516404 141 ntBASIC2.58□□□□□ -2
UPK1AO00322 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
UPK1AO00322 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.58□□□□□ -2
UPK1AO00322 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.58□□□□□ -2
UPK1AO00322 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.58□□□□□ -2
UPK1AO00322 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
UPK1AO00322 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.58□□□□□ -2
UPK1AO00322 NIFKP8-201ENST00000560500 874 ntBASIC2.58□□□□□ -2
UPK1AO00322 GTF2IP8-201ENST00000560687 584 ntBASIC2.58□□□□□ -2
UPK1AO00322 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.58□□□□□ -2
UPK1AO00322 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.58□□□□□ -2
UPK1AO00322 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.58□□□□□ -2
UPK1AO00322 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.58□□□□□ -2
UPK1AO00322 XIAPP1-201ENST00000603162 600 ntBASIC2.58□□□□□ -2
UPK1AO00322 AL671309.1-201ENST00000603750 544 ntBASIC2.58□□□□□ -2
UPK1AO00322 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.58□□□□□ -2
UPK1AO00322 VN1R9P-201ENST00000614184 867 ntBASIC2.58□□□□□ -2
UPK1AO00322 AC073968.1-201ENST00000618594 637 ntBASIC2.58□□□□□ -2
UPK1AO00322 AC018755.4-201ENST00000619715 454 ntBASIC2.58□□□□□ -2
UPK1AO00322 AC098679.5-201ENST00000624394 571 ntBASIC2.58□□□□□ -2
UPK1AO00322 CR381572.1-201ENST00000625098 102 ntBASIC2.58□□□□□ -2
UPK1AO00322 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.58□□□□□ -2
UPK1AO00322 AL163152.1-201ENST00000642001 374 ntBASIC2.58□□□□□ -2
UPK1AO00322 AC109315.1-201ENST00000584143 1347 ntBASIC2.58□□□□□ -2
UPK1AO00322 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
UPK1AO00322 ZNF833P-201ENST00000424938 1494 ntBASIC2.58□□□□□ -2
UPK1AO00322 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
UPK1AO00322 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.57□□□□□ -2
UPK1AO00322 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
UPK1AO00322 RNU6-989P-201ENST00000362756 107 ntBASIC2.57□□□□□ -2
UPK1AO00322 RPL21P75-201ENST00000396599 483 ntBASIC2.57□□□□□ -2
UPK1AO00322 AL512633.1-201ENST00000399931 655 ntBASIC2.57□□□□□ -2
UPK1AO00322 RPL21P28-201ENST00000401418 483 ntBASIC2.57□□□□□ -2
UPK1AO00322 AL592114.1-201ENST00000403842 483 ntBASIC2.57□□□□□ -2
UPK1AO00322 AC246680.2-201ENST00000422106 389 ntBASIC2.57□□□□□ -2
UPK1AO00322 FAM204CP-201ENST00000424489 642 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms